Arcobacter aquimarinus: AAQM_1690
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Entry
AAQM_1690 CDS
T06604
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aaqi
Arcobacter aquimarinus
Pathway
aaqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAQM_1690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaqi03019
]
AAQM_1690
Enzymes [BR:
aaqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AAQM_1690
Messenger RNA biogenesis [BR:
aaqi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AAQM_1690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
P-loop_SecA
CMS1
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
QKE26433
UniProt:
A0AAE7B2U3
LinkDB
All DBs
Position
complement(1687060..1688259)
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AA seq
399 aa
AA seq
DB search
MSFSKLGLCSELLRAIKEEGYTTPTPIQSKSIPVILSKKDVLAAAQTGTGKTAGFTLPLL
QRLKKSHSKDKKSHIRALILIPTRELAAQVAQSVETYGKHLPFKTAVIFGGVGINPQKAL
LRKGVDIVIATPGRLLDLISQDSLNLSKIEFLILDEADRMLDMGFINDIKKILKLVPKQR
QNLLFSATFSPDIKKLADGLLNSPILIEAAKANSTSYKVEQTVHHVDRDRKKELLLHLIN
KNNWQQVLVFTRTKHGANKLSEALVKNGISSSAIHGNKSQGARTKALDDFKLGNVKVLVA
TDIAARGIDIDNLPYVINFELPNVAEDYVHRIGRTGRAGNSGEAISLVCVDEHDYLFGIE
RLIKQKIKKIEINGFKVNPNIKAEPIGNRSNKANSSKNI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttcaaaattaggtttgtgttcagaacttcttcgtgcaattaaagaagaggga
tacacaacgccaacgccaattcagtcaaaatcaattccagtgattttatcaaaaaaagat
gttttagcagctgctcaaacgggtactggaaaaacagctggttttacacttccactttta
caaagattaaaaaagagtcattcaaaggataaaaaatctcatataagagctttgatttta
attcccacaagagaacttgcagctcaagttgcacaaagtgtagaaacttatggaaaacat
cttccttttaaaacggcagttatttttggaggagttggtataaatccacaaaaagcactt
ctacgaaaaggtgtggatattgtgatagcaactcctggaagattacttgatttgatttct
caagatagtttgaatttatcaaaaattgaatttctaattttagatgaagcagatagaatg
cttgatatgggatttataaatgatattaaaaagattttaaaattagttccaaaacaaaga
caaaatttacttttttcagcaacattttcgcctgatattaaaaaattagcagatggttta
ctaaattctcctattttaatagaagcagcaaaggcaaatagcacttcatacaaggttgag
caaactgttcatcatgtggatagagatagaaaaaaagagcttttattgcatttaataaat
aaaaacaattggcaacaagttttagtttttacaagaacaaaacatggagcaaataaacta
agtgaagcacttgtaaaaaatggtatctcttcatctgcaattcatggaaacaaatctcaa
ggtgcaagaacaaaagctttagatgatttcaagctaggaaacgtaaaagttttagttgca
actgatattgctgcaaggggaattgatatagataatcttccttatgttataaacttcgaa
ttaccaaatgttgcagaagattatgttcacagaattggaagaacaggaagggctgggaat
tcaggtgaggctatatctttagtttgtgtagatgaacatgattatttgtttggtattgaa
agattaatcaagcaaaagattaaaaagatagaaataaatggatttaaagtaaatccaaat
atcaaagcagaacctattggaaatagaagtaacaaagctaatagttcaaaaaatatttaa
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