Alcaligenes aquatilis: D3M96_07535
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Entry
D3M96_07535 CDS
T05678
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
aaqu
Alcaligenes aquatilis
Pathway
aaqu02020
Two-component system
aaqu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aaqu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D3M96_07535
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D3M96_07535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaqu03021
]
D3M96_07535
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
aaqu02035
]
D3M96_07535
Transcription machinery [BR:
aaqu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D3M96_07535
Bacterial motility proteins [BR:
aaqu02035
]
Flagellar system
Flagellar assembly proteins
Stator
D3M96_07535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
cwf21
KORA
HTH_37
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AYN20390
UniProt:
A0A3G2HTB8
LinkDB
All DBs
Position
1655447..1656208
Genome browser
AA seq
253 aa
AA seq
DB search
MPRSEDVLVEQYAPLVRRQALQLVSRLPPSVELDDLMQAGMMGLLDAVRRYQVVAEAQFE
TYAVTRIRGAMLDELRSQDWLPRSVRTKARQIEVAVSTLRQELLREPTESEIAQALSMSM
DDYYELLDEAVGVQVIHYEDLKRHADPSADALEFLEDNSREQAYFDNPLNLLTSQGLRQA
LITAIDQLPEREKLLFALQFEQDLNQKEIALVLGVTEGRVSQLRSQAVARIRASLAKDKW
DAISDSAEFQVLL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgttcagaagacgtcctggttgagcagtacgccccactggtgcgccgccaggcg
cttcagcttgtgtcgcgcctgccccccagtgttgagctggatgatctgatgcaagcgggc
atgatgggcctgctcgatgccgtacgccgctaccaggtggtggccgaggctcagtttgaa
acctatgccgtgacccgtatccgtggggccatgctggacgaattacgcagtcaggactgg
ttgccacgcagtgtgcgcaccaaagctcgtcagattgaagtggccgtcagcaccttgcgt
caggagctgttgcgcgagcccaccgagtcggaaattgcccaagccctgtccatgagcatg
gacgattattacgagctgctggacgaggcagtgggggttcaggtgattcactacgaagac
ctgaaacgccatgctgacccatcagccgatgcgctggagtttctggaggacaattcgcgg
gagcaggcatactttgacaacccgctgaacctgttgacctcccaggggctgcgacaagcc
ttgattaccgccatcgatcaactgcccgagcgtgaaaaactgctttttgcgctgcaattc
gagcaagacttgaaccagaaagaaatcgcgctggtgctgggggtgaccgaaggtcgggtg
tctcaacttcgtagccaagccgtggcccgtatccgtgccagtctggcaaaagacaagtgg
gacgctatttctgacagtgctgagttccaggtgcttctgtaa
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