Alcaligenes aquatilis: D3M96_08805
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Entry
D3M96_08805 CDS
T05678
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aaqu
Alcaligenes aquatilis
Pathway
aaqu03420
Nucleotide excision repair
aaqu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aaqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D3M96_08805
03430 Mismatch repair
D3M96_08805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaqu03400
]
D3M96_08805
Enzymes [BR:
aaqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D3M96_08805
DNA repair and recombination proteins [BR:
aaqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D3M96_08805
MMR (mismatch excision repair)
Other MMR factors
D3M96_08805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AYN20619
UniProt:
A0A3G2HUF0
LinkDB
All DBs
Position
1936754..1939048
Genome browser
AA seq
764 aa
AA seq
DB search
MMDRLNPEQRAAVTLPSGHALVLAGAGSGKTSVLTSRMAWLIQTGQVSPHGLAAVTFTNK
AAREMLTRLTSLLPIDTRGMWVGTFHGLCNRLLRMHYRDAGLVQTFQILDTADQLASIKR
MVKANNVDDEKFPPKEIQKFINACKEDGQRPGDLEAHDPHRRRLIELYQLYQEQCEREGV
VDFGELLLRAYELLSRNAPIREHYQRRFKHILVDEFQDTNVLQYRWLRLLAGDQACMFAV
GDDDQSIYAFRGANVGNMADFERDYARGNVIRLEQNYRSCGHILDSANALIENNSGRLGK
NLWTDSGEGELVRISELASDALEAQWIVDEVRALIAEGKPRREIAILYRSNAQSRVIEHR
LFSQGLPYKVYGGHRFFERQEIKHVLAYLRLMDNADDDTAFLRVVNFPTRGIGARSVEQL
ADLARERGTSLLRAIPYLQGRAAASLMRFSNLIQDMASQAQILSLPELIEHVVHDSTLLA
HYQADREGAERLENLQELVNAATVFVGEEGFAELPAGRVPEAVAGESEQAMQNPDQPAAS
VLAPMSPLGSFLTHASLEAGDNQAQAGQDAIQLMTIHAAKGLEFDAVFITGLEEGLFPHE
NSLFDPGGIEEERRLMYVAITRARQRLYITLAQSRMLHGQTRYAMRSRFLEELPEQHIKW
LSARYTSPPMQSEASSGAFRRGQSWESKDKSYSAQPYGGRSHTSVLEVNGQTFRVGQGVH
HNRFGDGTIVNLTGQGDDAQALIQFREVGSKTLALAIAKLDPVS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcgcttaaacccggaacagcgagccgccgttactctcccctctggccatgcc
ctggtgctggccggagcgggtagcggaaaaaccagtgtcctgacctcccgaatggcctgg
ttaatccagactgggcaggtcagccctcacggactggccgctgttaccttcaccaacaaa
gccgcgcgcgaaatgctgacgcggcttacttctttattgcctatcgatactcgcggaatg
tgggtcgggacctttcacggcctgtgtaatcgcttgctgcgcatgcattaccgcgatgcc
ggtctggtacagacgttccagattctggatacggcagatcagttggcctccatcaagcgc
atggttaaggccaacaatgtggatgatgagaaatttccgcccaaggaaattcagaagttc
atcaacgcctgtaaagaagacggccaacgtcctggcgacctggaagctcatgaccctcac
cgccgccgcctgatcgagctttaccagctttatcaagagcagtgcgaacgtgaaggtgtg
gtggactttggcgagctactgctgcgcgcttacgagctgctgtctcgcaatgcaccaatc
cgcgagcattatcagcgccgcttcaaacacattctggtggacgagttccaggacaccaac
gtgctgcagtatcgctggttgcgtctgttggccggtgatcaggcctgcatgtttgccgtg
ggcgacgatgaccagtcgatctatgctttccgtggcgcgaacgtgggcaatatggccgac
ttcgagcgcgactatgcccgtggcaatgtgatccgcctggagcagaactatcgttcctgc
ggtcatattctggattccgccaacgcgctgatcgagaacaatagtggtcgcctgggcaag
aatctgtggaccgatagcggcgaaggcgagctggtacgcatcagcgaactggcttcggat
gccctggaagcacagtggattgtggatgaagtccgcgccctgattgctgaaggcaagcca
cgtcgtgaaattgccattctgtatcgcagcaacgcccagtcccgagtgattgagcacagg
ctgttttcccaaggtttgccctacaaagtgtatggcggccaccgtttcttcgagcgtcag
gaaatcaagcacgtgctggcttacttgcgcctgatggataacgcggatgatgacaccgct
tttctgcgcgtcgtgaatttcccgactcgcggaattggtgcccgttcggtagagcaactg
gccgatttggcgcgcgagcgcggtaccagtttgctgcgtgccatcccttatctgcaagga
cgtgcggctgccagcttgatgcgtttctcgaacctgattcaggatatggccagccaggcg
cagatcctgtctttgcccgagctgattgagcacgttgtccacgacagtaccttgctggcc
cattatcaggccgaccgcgaaggtgccgaacgcctggaaaacttgcaggagttagtcaac
gcggccacggtttttgtgggtgaggaaggctttgctgagctgcccgcaggtcgagtgcct
gaagccgtggcgggcgagtccgagcaggccatgcaaaatccagatcagccggctgcctct
gtgctcgcccccatgtcgccgttgggctccttcctgacccatgcttctttggaagcaggg
gacaatcaggcccaggcaggccaggatgccattcaactgatgacgatccatgccgccaaa
ggtctggagttcgatgcggttttcattactggcctggaagagggcttgttcccgcatgag
aacagcttgttcgatccgggcggtatcgaggaagagcgtcgcttgatgtacgtggcgatt
acgcgggcgcgtcagcgtctatacatcaccttggcgcaaagccgcatgttgcacggccag
acgcgttacgccatgcgttcgcgctttctggaagagttgccggagcaacacatcaagtgg
ttgtcggcccgctacactagcccgcccatgcaatccgaggctagctcgggggcatttcgt
cgcggtcaaagctgggagtccaaagacaagagctattcggcccagccttacggcggtcgt
agccacaccagtgtgctggaagtgaatgggcagacgttccgtgtggggcagggagtgcat
cacaaccgttttggtgacggcaccatcgttaatctgacggggcagggtgacgacgcccag
gccttgattcagttccgtgaagttggtagcaagactctggccttggccatcgccaagctg
gatcctgttagctga
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