Alcaligenes aquatilis: D3M96_14105
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Entry
D3M96_14105 CDS
T05678
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aaqu
Alcaligenes aquatilis
Pathway
aaqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D3M96_14105 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaqu03019
]
D3M96_14105 (pnp)
03016 Transfer RNA biogenesis [BR:
aaqu03016
]
D3M96_14105 (pnp)
Enzymes [BR:
aaqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
D3M96_14105 (pnp)
Messenger RNA biogenesis [BR:
aaqu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D3M96_14105 (pnp)
Transfer RNA biogenesis [BR:
aaqu03016
]
Prokaryotic type
tRNA degradation factors
D3M96_14105 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
KH_KhpA-B
LcnG-beta
KH-I_KHDC4-BBP
DUF5813
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
AYN21563
UniProt:
A0A3G2HWX7
LinkDB
All DBs
Position
complement(3097147..3099285)
Genome browser
AA seq
712 aa
AA seq
DB search
MFNKVTKSFQYGEHTVVLETGEIARQASGAVLVSIEDTVVLATVVGKSEAKAGQDFFPLT
VDYVEKTYSAGKIPGGFFKREGRQSEREILISRLIDRPLRPLFPEGFYNEVQVIIHTVSV
NPEIDPDIAAMIGASAALAISGIPFNGPVGAARVGYVDGQYVLNPSATQLKSSALDLVVA
GTEQAVLMVESEAKQLSEEIMLGGVVFAHEQMQAAINCIHELVEEAGKPEWDWQPAAVNE
SLLASVTAAAEEGLTQAYQTREKQARTEQVRAVYAQVKETVKAQAEAAGQALPDMVAVEN
MMFDLESKIVRSRILSGESRIDGRDTRTVRPISIRLGVLPRAHGSALFTRGETQALVVTT
LGTKQDEQIIDSIMGEYRDRFMMHYNMPPFATGEAGRFGAPKRREIGHGRLAKRALTPLL
PAAEDFQYSIRVVSEITESNGSSSMASVCGGSLSMMDAGVPVQDHVAGVAMGLIKEGNKF
AVLTDILGDEDHLGDMDFKVAGTEKGITALQMDIKIQGITKEIMQVALAQAHEGRMHILG
KMKESIDGSRTEMSEFAPRMLTVKINPEKIRDVIGKGGATIRALTEETGTQIDISDDGTI
TIASADLDKAREAERRIKELTAEVEVGQEYEGPVMRLLDFGAIVQVLPGRDGLLHISEIA
NYRIANINDVLKVGQVVKVKVIEADEKGRLRLSIKAIGGIEAQGGPAAPAAS
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaagtcaccaagtctttccagtacggcgaacataccgtcgttctggaaacc
ggcgaaatcgcacgtcaggcgtcaggtgccgtgctggtttcgattgaagacactgttgtg
ttggccactgttgttggcaaaagcgaagcgaaagcaggtcaggacttcttccctctgacc
gttgattacgtcgaaaaaacctactccgctggcaagatccctggtggtttcttcaagcgt
gaaggccgccagtccgagcgcgagatcctgatctcccgcctgatcgaccgtccactgcgt
cctctgttccctgaaggcttctacaacgaagttcaggtcatcattcacacggtatcggtc
aatcctgaaattgatcctgatatcgctgccatgatcggcgcttcggctgctctggctatc
tccggcattcctttcaatggtcctgtgggcgctgctcgcgtgggttatgttgatggccag
tacgtgctgaacccatccgccactcagttgaaatcctcggctctggatctggttgtggcc
ggtaccgaacaagctgtgctgatggttgagtccgaagccaagcaattgtctgaagagatc
atgctgggtggtgtggtgtttgctcacgagcaaatgcaagcagccatcaactgcattcac
gaactggttgaagaagctggcaagcccgagtgggattggcagcctgctgctgttaacgaa
agcctgctggcttcggtaaccgctgccgctgaagagggcctgacacaagcctaccaaact
cgcgaaaaacaggctcgtaccgagcaagtgcgcgctgtttacgctcaagttaaagaaacg
gtcaaggctcaagctgaagccgccggtcaggccctgcctgatatggttgccgtcgaaaac
atgatgttcgacctggaaagcaagatcgtgcgttcgcgcatcttgagcggcgagtcccgt
attgatggtcgtgacacccgtaccgttcgtcctatcagcatccgtctgggcgttctgcct
cgtgctcacggtagcgccttgttcacacgtggcgaaactcaggctttggtggtgaccacc
ctgggtaccaagcaagacgagcagatcattgattcgatcatgggtgaataccgcgatcgc
ttcatgatgcactacaacatgcctccgttcgccaccggcgaagctggccgtttcggcgct
cccaagcgtcgtgaaatcggtcacggtcgtctggccaagcgtgctttgactcccttgctg
ccagccgctgaagatttccagtactccatccgcgtggtgtccgagatcactgaatctaac
ggttcctcctccatggcatccgtgtgtggtggctccctgtccatgatggacgctggtgtg
cctgtgcaggatcacgtggctggtgtggccatgggtctgatcaaggaaggcaacaagttt
gctgtgctgaccgacattctgggtgacgaagatcacctgggcgatatggacttcaaggtt
gccggtaccgagaaaggtattactgctttgcagatggacatcaagatccagggcatcacc
aaggaaatcatgcaggttgcattggctcaggctcacgaaggccgtatgcacatcctgggc
aagatgaaagaatccatcgacggttcccgtaccgagatgtccgaattcgcgcctcgcatg
ctgaccgtgaagatcaaccccgagaagattcgtgacgtgattggtaagggtggtgccacc
atccgcgccctgaccgaagaaaccggtacacagatcgatatttcggatgacggcaccatc
actatcgctagcgccgatctggacaaggcccgcgaagccgagcgtcgtatcaaagaactg
accgccgaagtggaagtgggtcaggaatacgaaggccccgtgatgcgcttgctggacttt
ggtgcgattgtgcaagtgctgccaggccgtgatggcttgctgcatatctccgagattgcc
aactaccgtatcgccaacatcaatgacgtgctgaaagtgggtcaggttgttaaggtcaag
gtcatcgaagctgacgagaaaggtcgtctgcgtctgtcgatcaaggcaatcggcggtatc
gaagcccaaggcggcccagccgctcctgctgcttcctga
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