Alcaligenes aquatilis: D3M96_14755
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Entry
D3M96_14755 CDS
T05678
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
aaqu
Alcaligenes aquatilis
Brite
KEGG Orthology (KO) [BR:
aaqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aaqu03009
]
D3M96_14755 (dbpA)
Enzymes [BR:
aaqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
D3M96_14755 (dbpA)
Ribosome biogenesis [BR:
aaqu03009
]
Prokaryotic type
rRNA helicases
D3M96_14755 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AYN22826
UniProt:
A0A3G2I083
LinkDB
All DBs
Position
3219135..3220535
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AA seq
466 aa
AA seq
DB search
MSPIVPHTSFSTLPLLPALLETLDSLGFEKMTAIQEQSLPLILQGRDLIAQAKTGSGKTA
AFGLGLLQTLNPSKLTPQALVICPTRELADQVTTELRRLARQIPNVRMLTLCGGVPSRPQ
TEALRNGAHVVVGTPGRIQDHLERGNLDLSALKTLVLDEADRMVDMGFHDDIVAIASHCP
PRRQTLLFSATYPENIRKLSARFLHTPAEVKVEALHDASQIEQIFYEVHPEQRLSAVVTL
LEHFRPCSTLVFCNTKMRCQEVVEELQSEGIQALALTGDLEQRDRDEILVQFSNQSCAVL
VATDVASRGLDIQNLGAVINVDVTKDSEVHIHRIGRVGRGDQKGLALNLVSRNELRWVKL
IEDFQGREVKWGNLKALRSQSKEPLRAPMMTLEIQGGKKDKLRPGDLLGALTRDVGLKGD
QVGKIAITDARSYVALDRGIARQFFDRISNANIKGRRFRMRFVEDK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccatcgtgccccatacctccttcagtacccttccccttttgcccgccttgctt
gaaaccctggatagcctgggttttgaaaaaatgacggctattcaggaacagagcctgccg
ctgattctgcaaggccgcgacctgattgcccaagccaagaccggcagcggcaaaaccgcc
gcatttggcctgggtctgttgcaaaccctcaaccccagcaaactgacgccacaagccttg
gtgatctgccccacgcgcgaactggccgatcaggtcacgaccgaactgcgtcgtctggcc
cgccagattcctaacgtgcgtatgctgacgctgtgtggtggggttccctcgcgcccgcaa
acagaagccttgcgcaacggtgctcacgtagtggtgggcacaccgggccgcatccaggac
cacctagagcgcggcaacctggacttgtccgccctgaaaaccctggtactggacgaagcc
gaccgtatggtggacatgggctttcacgatgacatcgtggccattgcctcgcactgcccg
ccccgtcgtcaaaccttgctgttctcggccacctacccggaaaacattcgcaagctcagc
gcccgctttctgcatacgcccgccgaagtcaaagtggaagcactgcacgatgccagccag
atcgaacagattttttacgaagttcaccccgagcagcgtttgtctgctgtggtgaccctg
ctggagcatttccgcccctgctcgaccctggttttctgcaacaccaagatgcgttgccag
gaagtcgtcgaagagctgcaatccgaaggtatccaggctctggccttgaccggcgatctt
gagcagcgtgatcgcgacgaaattctggtgcagttctccaaccagagctgcgccgtgctg
gtcgccaccgacgtggcctcgcgcggtctggatattcagaatctgggggccgtcatcaac
gtagacgtcaccaaagacagcgaagtgcatatccaccgcattggccgtgttggtcgtggt
gatcaaaaaggcctggccttgaatctggtctcgcgcaacgagctgcgctgggtcaagctg
attgaagacttccagggccgtgaagtgaaatggggcaatctgaaggccttgcgatctcaa
tcaaaagaacccttgcgcgcgcccatgatgacactggaaattcagggtggcaaaaaagac
aagctgcgccccggcgacctgctcggcgccttgacgcgtgatgtcggtctgaaaggggat
caggtcggcaagattgccattaccgacgcccgctcctacgtggccctggatcgtggaatt
gcccgtcaattctttgaccgtatttccaacgccaacatcaaaggccgccgcttccgtatg
cgctttgtggaagacaaatga
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