Alcaligenes aquatilis: D3M96_15320
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Entry
D3M96_15320 CDS
T05678
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
aaqu
Alcaligenes aquatilis
Pathway
aaqu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D3M96_15320 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaqu03400
]
D3M96_15320 (ruvB)
Enzymes [BR:
aaqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D3M96_15320 (ruvB)
DNA repair and recombination proteins [BR:
aaqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D3M96_15320 (ruvB)
RecFOR pathway proteins
D3M96_15320 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
nSTAND3
AAA_22
AAA_3
Rad17
AAA_14
TsaE
DUF815
AAA_2
AAA_18
AAA_17
RNA_helicase
Bac_DnaA
Sigma54_activ_2
NTPase_1
NB-ARC
ABC_tran
AAA_28
NACHT
IstB_IS21
AAA_24
AAA_33
AAA_25
Parvo_NS1
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AYN21783
UniProt:
A0A3G2HXI5
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All DBs
Position
3337715..3338785
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AA seq
356 aa
AA seq
DB search
MAIHSDSLSSLPSEQRIITPKPLSPNEESIERALRPKMLEDYVGQARAREQLEIFIAAAR
QRQEALDHVLLFGPPGLGKTTLAHIIAHEMGVNLRQTSGPVLERPGDLAALLTNLEPNDV
LFIDEIHRLSPVVEEILYPALEDFQIDILIGEGPAARSVKLDLQPFTLVGATTRAGMLTN
PLRDRFGIVSRLEFYDVKDLTHIVARSAGLLNVSTTDEGTYEIARRSRGTPRIANRLLRR
VRDYAEVKTGGIIHTECAQAALSMLEVDPQGLDLMDRKLLEAIIHKFDGGPVGVDSLAAA
IGEERDTIEDVIEPYLIQHGFLQRTPRGRIATLNTWRHLGLTPPRNTQGQDLFEAE
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggccatacactccgattcgctctccagcctaccttctgaacagcgcatcattacgccc
aaacccttgtcgcccaacgaagagtccatcgagcgcgccttacggcccaagatgctggag
gactatgtcgggcaagctcgtgcgcgtgaacagctagaaattttcatcgctgctgctcga
caacgtcaggaggccttggaccacgttttgctgtttggcccgcccggtctgggtaaaacc
actctggctcacatcattgcccatgaaatgggcgtgaatctacgtcaaacctccggcccc
gtgctggagcgccccggtgatctggctgctctgctgacgaatctggaacccaacgacgtc
ctgtttattgacgaaatccaccgtctctcccccgttgtcgaagaaattctgtacccggcc
ctggaagacttccagattgatattttgattggtgaaggcccggccgcccgcagcgtcaaa
ttggatttgcagccctttaccctggtcggcgcgacaacccgagcaggcatgctgaccaac
cccttgcgcgaccgttttggcattgtgtcccgcctggagttctatgacgtcaaagactta
acgcacattgtggcacgtagtgccggcctgcttaatgtcagcacaacagacgagggcacc
tacgaaattgcccgccgctcacgtggcacaccgcgtattgccaaccggcttttgcgccgg
gtgcgcgactacgccgaagtcaaaaccggcggcatcatccataccgaatgcgcccaagcc
gctctgtccatgctggaagtggacccacaaggtctggatttaatggatagaaagttgttg
gaagccatcatccataaattcgacggtggtccagtaggagtagacagtctggccgctgcc
attggtgaagagcgcgacacaatcgaggacgtgatcgagccctatctgatccagcatggt
tttttacaacgcactcccaggggtcgtattgccaccctgaacacctggcgccacctgggg
ctcacacccccacgcaatacacagggtcaggacctgttcgaggcagaataa
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