Alcaligenes aquatilis: D3M96_15340
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Entry
D3M96_15340 CDS
T05678
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
aaqu
Alcaligenes aquatilis
Brite
KEGG Orthology (KO) [BR:
aaqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaqu03400
]
D3M96_15340
Enzymes [BR:
aaqu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
D3M96_15340
DNA repair and recombination proteins [BR:
aaqu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
D3M96_15340
Prokaryotic type
D3M96_15340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AYN21786
UniProt:
A0A3G2HX89
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All DBs
Position
3341439..3342878
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AA seq
479 aa
AA seq
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MSISTAPDQTPRVLCWLRRDLRLHDHAALHHALKSGLPVACVFIFDSTILDSLPANDVRL
AFIHDSLLQVQEQLRQYGSELITAHGDPVQKIPELANRLNAKAVYANEDYEPAAMARDQT
VSHTLSSQGIELKLFKDQVIFARDEILTQQKQPYTVFTPYKRNWLARIQSEDAQAYDCSQ
GEWAALPKQALPDLEELGFQEKSLAKLLNPAGWQGAQTLLEQFEPRIHAYHERRDFPAKR
GVSYLAPHLRFGTLSIRQAVSLAWPSDSDGAATWLSELIWREFYQQFLWHHPETATESFK
PAYKDLPFPNREDWFQAWKEGRTGYPIVDAAMRQLNQSGYMHNRLRMISASFLVKDLLID
WRWGEQYFAQKLLDYDMASNVGGWQWAASTGCDAQPYFRIFNPITQSRKFDPDGQFIRRY
VPELASLDKQAIHAPWQAKQLPIEFRSGKDYPAPIVDHDTQRHLALALFKQAGEQEQAD
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatctctactgctcccgatcaaaccccacgtgttctatgctggttgcgccgcgat
cttcgcttgcacgaccacgcggccttgcaccacgcgctgaaaagcggtttgcctgtggcc
tgtgtgtttatctttgacagcacaatcctggactccttgcctgccaacgatgtacggctg
gcttttatacatgacagtctgctgcaggtgcaggagcaactgcgccaatatggcagtgaa
ctgatcacggctcacggtgacccagtacagaaaattcctgaattggcaaaccgcctgaat
gcgaaggcggtctatgccaatgaagactacgaacctgcggccatggcgcgagatcagact
gtcagtcataccctgtctagccaaggcatagaactaaagctattcaaggaccaggtcatc
tttgcgcgggatgaaatcctgacacagcaaaaacaaccgtatacggtttttactccctac
aagcggaactggctggcgcgtattcaatcggaggatgcacaagcctatgactgctcgcaa
ggagaatgggccgccctgccaaagcaagccctacctgacttggaagaattaggctttcag
gaaaaatctctcgcgaaactgctcaatcccgccggttggcaaggcgcccagactttgctg
gaacaatttgagcccagaatccatgcttatcatgaacgtcgggactttccggccaaacga
ggcgtgtcctatttggccccccatctgcgctttggaacactatccatacgccaagccgta
tctctggcctggcccagcgactccgatggcgcggccacctggctgagcgaactgatctgg
cgagagttctaccagcagttcctatggcatcacccagaaacggcgacagaaagcttcaag
ccggcctacaaggacctgcccttccctaatcgcgaagactggtttcaggcctggaaagaa
ggtcgaaccggctatccaattgttgacgccgccatgcgtcaattgaaccagtcaggctat
atgcacaaccggctacgcatgataagtgcgtcctttctggtaaaagacttgctgatagac
tggcggtggggggagcaatattttgcccagaagctgcttgattacgatatggcttctaac
gtggggggctggcaatgggccgcttccaccggatgcgatgcacagccttattttcgtatc
tttaaccccatcacccaatcgcgtaaatttgatccagacggacaattcatacgtcgatat
gtgcccgaactggcgtcgctggataaacaagctattcacgcgccttggcaggccaagcag
ctccctatcgaattcaggtcagggaaagattacccggcccccatcgtagatcatgacaca
caacggcatcttgctttggccttattcaagcaagcaggagagcaagaacaagcggattga
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