Alcaligenes aquatilis: D3M96_17625
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Entry
D3M96_17625 CDS
T05678
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
aaqu
Alcaligenes aquatilis
Brite
KEGG Orthology (KO) [BR:
aaqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aaqu03009
]
D3M96_17625 (rimO)
Enzymes [BR:
aaqu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
D3M96_17625 (rimO)
Ribosome biogenesis [BR:
aaqu03009
]
Prokaryotic type
ribosomal protein modification factors
D3M96_17625 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAM_2
Radical_SAM
UPF0004
TRAM
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AYN22201
UniProt:
A0A3G2HZB2
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Position
3840056..3841375
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AA seq
439 aa
AA seq
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MSAPKVGFVSLGCPKALVDSERILTQLRTDGYQITPSYDNADVVVVNTCGFIDSAKAESL
EAIGEALAENGRVIVTGCMGVDEGLIRDVHPSVLSVSGPQQYEQVLRAVREAAPPSLDHN
PYIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLGEAERLVK
AGVKELLVISQDTSAYGVDIRQRTGFWNGRPVKSSMLDLSAALSELGAWVRLHYVYPYPH
VDNIIPLMAEGKVLPYLDIPFQHASPSVLRAMKRPAFEDRTLSRIKQWRQDCPDLTIRST
FIVGFPGETEEDFQYLLDWMTEAQLDRVGCFQYSPVEGATANKLDGIVPDEVKQERWERF
MEHQQAISTARLAAKVGREMDVLIDEIDEDGDAVGRSSADAPEIDGNVFITSEQKLEPGQ
MVRVRITDSSEYDLFGEQI
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccccaaagtcggattcgtgagcctgggttgtcccaaggccctggtcgattcc
gaacgaattcttacccagctgcgtaccgacggctatcagatcacccccagctacgacaat
gcggatgtggtggtggtcaatacctgtggctttatcgacagcgccaaggccgaatcgctg
gaagcgatcggcgaggcactggctgagaatggccgcgtcattgtcacaggctgcatgggt
gtggacgaaggcctgattcgtgatgtgcacccttccgtgctgtccgtcagcggcccccag
caatacgagcaggtactacgcgccgtgcgtgaagccgcgccgccctcgctggatcacaat
ccctatattgatctggtgcccccgcaaggcattaagctgaccccgcgtcactacgcgtat
ctgaagatttccgaaggctgtaaccacagctgcagcttctgtattattccgtccatgcgc
ggcaagctcgtcagccgtcctgtcggtgatgtcctgggcgaggccgagcgcctggtcaag
gccggcgtcaaagaactgttggtgatctcgcaggacaccagcgcctacggcgtggacatc
cgccagcgtaccggcttctggaatggccgccccgtcaagagcagcatgctggacttgagc
gcggccctgtccgaactaggtgcctgggtacgcctgcattacgtctacccgtaccctcat
gtggacaatatcattccgctgatggccgaaggcaaagtgctgccttacctggatattccg
ttccagcacgccagcccttccgtgttgcgcgccatgaagcgccctgcttttgaagaccgc
accctgtcgcgcatcaagcaatggcgtcaagactgcccggatctgaccatccgctccacc
ttcatcgtgggtttccccggcgagaccgaggaagacttccaatacctgctggactggatg
accgaagcccaactggatcgcgtcggctgtttccagtactcccccgtggaaggcgctacc
gccaacaaactcgatggcatcgtccctgatgaagtcaaacaagagcgttgggagcgtttc
atggagcatcaacaagccatctccaccgctcgtctggccgccaaagtgggacgcgaaatg
gacgtgctgattgatgagatcgacgaagacggcgatgccgttggccgctccagcgccgac
gcccccgaaattgacggcaacgtcttcatcaccagcgaacaaaaactggaacccggccaa
atggtgcgcgtacgcattacggattccagtgaatatgacttgtttggtgaacagatctaa
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