Alcaligenes aquatilis: D3M96_18770
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Entry
D3M96_18770 CDS
T05678
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
aaqu
Alcaligenes aquatilis
Pathway
aaqu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
aaqu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D3M96_18770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaqu03021
]
D3M96_18770
Transcription machinery [BR:
aaqu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D3M96_18770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
P5CR_dimer
Motif
Other DBs
NCBI-ProteinID:
AYN22411
LinkDB
All DBs
Position
complement(4090567..4091106)
Genome browser
AA seq
179 aa
AA seq
DB search
MYSAESVESLYCDHHSWLQRWLHHRLGGADQAADLAQDTFVRLLSSRSRWQFASPGEARA
YLRKTAQNLCINLWRRQEIEQAWLDILAATPEHFYPSAERHAMILQALEEISAMLSSLSP
KAAKAFTLAVICEMTDDEVGAEMGISGRMVRKYVAQAMLGCISLHACQTVAELRQEPQY
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtattcagccgagtcggtcgaatcactgtactgcgaccaccacagctggttgcagcgc
tggctgcatcatcgattgggtggagcagaccaggcggctgacttggcgcaggacaccttt
gtacgcctgttaagcagccgttcccgctggcaatttgccagtcccggcgaagcccgtgcc
tacctgcgcaagacagcgcaaaacctgtgcatcaacttgtggcgacgtcaggaaattgaa
caggcctggctggatattctggccgctacgcccgagcacttttacccttcggcagaacgc
cacgccatgattttgcaggcgctggaagagatcagcgccatgctcagcagcctgtctccc
aaagcggccaaggcgtttaccctggccgtcatttgcgagatgacagacgatgaggtcggc
gcagaaatgggtatttccggccgcatggtgcgcaagtacgtggcacaagccatgttgggc
tgcatcagcctgcatgcttgccagaccgtcgccgaattgcgtcaggaacctcagtactaa
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