Alcaligenes aquatilis: D3M96_18880
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Entry
D3M96_18880 CDS
T05678
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
aaqu
Alcaligenes aquatilis
Brite
KEGG Orthology (KO) [BR:
aaqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaqu03021
]
D3M96_18880 (rpoH)
Transcription machinery [BR:
aaqu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D3M96_18880 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
NMO
HTH_PafC
HTH_AsnC-type
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
AYN22431
UniProt:
A0A3G2I013
LinkDB
All DBs
Position
complement(4115428..4116324)
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AA seq
298 aa
AA seq
DB search
MTQQANALALASGNELVAAVSNPGALGTIEAYISAVNRLPMLSAERETELGQRLRDQDDL
DAARELILSHLRLVVSIARQYLGYGLPHADLIQEGNVGLMKAVKRFDPERGVRLVSFAVH
WIKAEIHEYVVRNWRMVKVATTKAQRKLFFNLRRMRPDGQTLDTAQVDAIARELDVRPQD
VSEMEVRLSGHDMALEAPTNDDDDHFAPISYLSDEGQEEPSRVLERRAQDMLEGSGLEEA
IDTLDERSQRIVRARWLQDDGGATLHDLAAEFGVSAERIRQIEVAAFKKLRVALAAAV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgacacaacaagcgaacgctttggccctggcgtctggtaatgaactcgtcgccgccgtg
tctaatccaggcgcactggggacgatcgaagcgtatatttctgctgttaaccgtctgccc
atgctcagcgccgaacgcgaaaccgagctgggtcagcgcctgcgcgaccaggatgacctg
gatgctgcgcgcgaactgattttgtcgcacctgcgtctggtagtgtccattgcccgccag
tacctgggttacggcttgccgcatgccgacctgattcaggaagggaacgtgggcctgatg
aaggccgtcaaacgctttgacccagaacgcggtgtgcgtctggtgtcgtttgccgtgcat
tggatcaaggccgagattcatgaatacgtcgtgcgcaactggcgcatggtgaaagtggct
accaccaaggcccaacgcaaactgtttttcaatctgcgccgcatgcgtccggacggacaa
acgctggatacggctcaggtagacgcgattgcgcgtgaactcgatgtacgtccacaggac
gtcagcgagatggaagtgcgcctgtccggtcacgatatggctctggaagccccgactaat
gacgacgatgaccatttcgcgcctatttcttacctgtccgacgaagggcaggaggaaccc
tcgcgtgtgctggaacgtcgtgctcaggacatgctggaaggcagcggcctggaagaagcg
atcgacacgctggacgagcgttcgcagcgcattgtgcgcgcccgctggttgcaggacgat
ggtggcgcgaccttgcacgatctggctgccgaattcggcgtgtcggcagagcgtatccgt
cagatcgaagtggcggcattcaagaagctgcgtgtcgctttggcggcagcagtttaa
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