Alcaligenes aquatilis: D3M96_19265
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Entry
D3M96_19265 CDS
T05678
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aaqu
Alcaligenes aquatilis
Pathway
aaqu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aaqu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D3M96_19265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaqu03021
]
D3M96_19265
03400 DNA repair and recombination proteins [BR:
aaqu03400
]
D3M96_19265
Enzymes [BR:
aaqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D3M96_19265
Transcription machinery [BR:
aaqu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D3M96_19265
DNA repair and recombination proteins [BR:
aaqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D3M96_19265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AYN22506
UniProt:
A0A3G2HZB9
LinkDB
All DBs
Position
complement(4202356..4203339)
Genome browser
AA seq
327 aa
AA seq
DB search
MSQGFLKPRSIEVEPISKNHAKVIMEPFERGYGHTLGNALRRILLSSMTGYAPTEVQITG
VVHEYSTLPGVGEDVVDILMNLKGVVFKLHSREEVTLILRKEGAGQVLASDIELPHDVEI
INPNHVIATLTDDGKLEMQIKVEQGRGYVPGNVRALADDRTHTIGRIVLDASYSPVRRVS
YAVENARVEQRTDLDKLVLDIETNGVISPEEAVRQSARILMDQISVFAALEGVGDAYEAP
VRGAPQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKEVLAARGLTLGMKLENWPPLGLERP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaggttttttgaaaccccgttccattgaagtcgaaccaatcagcaaaaatcac
gccaaggtgatcatggagcctttcgagcgcggctacggccacactctgggcaacgcactg
cgtcgtattttgctgtcctccatgaccggctatgcaccgactgaagtgcagatcaccggt
gtggtgcacgaatactccacactgccaggtgtgggtgaggacgtggttgatatcttgatg
aacctcaagggcgtggtattcaagctgcatagccgtgaagaagttaccctgatcctgcgc
aaagaaggcgccggccaggtgttggctagcgacatcgaattgccgcacgacgttgaaatc
atcaaccccaatcatgtgattgccaccttgaccgatgacggcaagttggaaatgcagatc
aaggttgagcaaggccgtggctacgtgcctggtaacgttcgtgctctggctgatgaccgc
acccacacgatcggtcgtatcgtgctggacgcgtcctacagccctgtgcgtcgtgttagc
tacgcggtcgaaaacgcccgtgtggaacagcgtactgacctggacaagctggttctggac
atcgaaaccaacggcgtgatctcgcccgaggaagctgttcgccagtccgctcgcatcctg
atggatcaaatctccgtgtttgctgctctggaaggtgtgggcgatgcctacgaagctcca
gtacgtggcgcaccacagatcgatcctgtgttgttgcgtcctgtcgacgatctggaattg
accgttcgttccgcaaactgcctgaaagccgaaaatatctactacatcggcgatctgatc
cagcgtaccgaaaacgaactgttgaagactccaaacctgggccgcaagtccttgaacgaa
atcaaggaagtgttggctgcacgtggtctgactttgggcatgaagctcgaaaactggcca
ccactgggtcttgagcgtccataa
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