Actomonas aquatica: K1X11_001790
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Entry
K1X11_001790 CDS
T09911
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aaqw
Actomonas aquatica
Pathway
aaqw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaqw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K1X11_001790 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaqw03021
]
K1X11_001790 (rho)
03019 Messenger RNA biogenesis [BR:
aaqw03019
]
K1X11_001790 (rho)
Transcription machinery [BR:
aaqw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
K1X11_001790 (rho)
Messenger RNA biogenesis [BR:
aaqw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K1X11_001790 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Spore_III_AA
AAA_25
ATPase_2
AAA
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
WRQ88120
UniProt:
A0ABZ1C906
LinkDB
All DBs
Position
complement(459322..460491)
Genome browser
AA seq
389 aa
AA seq
DB search
MENSTDNAAQSSAPEKDDNLIQVEGVLDIDKQKGGNGTLLDLKRFGKRRPSDVFVPKELI
RRFKLRHGSLISGTAFPAEGRFPNPKMKFIESVDGLSIDDRKAKWDFTSFTTLSPDEKLK
LETKDGRMTCRAVDLFCPIGKGTRGLVVAPPRTGKTTLLRDMAQGVIENHPECHVMILLV
DERPEEVTDFKRSVTEAEVWASSNDEQVGNHIRIADMAIERAKRLVECGKDVVLFLDSLT
RLARAHNTQRNSGRTGSGGLDVRALEKPRQLFAAARNTEEAGSLTIVASILVETGSRMDD
VIFQEFKGTGNSDLVLDRKCAEMRIWPAINIQGSGTRKEELLIGAEDLDSIHFFRRALVQ
QKIEEATETMVSRLSKTKTNAEFLKLISR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattccaccgataacgccgctcaatcctccgctccggaaaaggacgacaacctc
atccaagttgagggcgtcctcgatattgataagcagaaaggcggcaacggcaccctcctc
gacctcaagcgcttcggcaaacgccgtccctccgatgtctttgtccccaaggagctgatc
cgccgctttaagcttcgccacggcagcctcatctccggcaccgcgttccccgccgagggc
cgcttccccaaccccaagatgaagttcatcgagtccgtcgacggactctccatcgacgac
cgtaaggccaagtgggacttcaccagcttcaccaccctctctcccgatgagaagctgaag
ctcgagaccaaggacggtcggatgacctgccgtgcggtcgaccttttttgcccgattggc
aaaggcacgcgcggcctcgtcgtcgccccgccccgcaccggcaaaaccacccttctccgc
gacatggctcagggcgtgatcgaaaaccaccccgagtgccacgtcatgatcctcctcgtc
gacgaacgccccgaagaagtcaccgacttcaaacgcagcgtgaccgaagccgaagtctgg
gcctcctccaatgacgagcaggtcggtaaccacatccgcatcgccgacatggccatcgag
cgcgccaagcgcctcgtcgagtgcggcaaggatgtcgtgctattcctcgactccctcacc
cgcctcgcccgcgcccacaacacccagcgcaactccggtcgcaccggctccggcggtctc
gatgtccgcgccctggagaagccccgccagctcttcgccgccgcccgcaacaccgaggaa
gccggctccctgaccatcgtggcttccattctggtcgaaaccggcagccgcatggacgac
gtgatcttccaggagttcaagggcaccggcaacagcgacctcgtgctcgaccgcaagtgc
gccgagatgcgcatttggcccgcgatcaacatccagggctccggcacccgtaaggaagaa
ctcctcatcggcgccgaagacctcgacagcatccactttttccgccgcgccctcgtgcag
cagaagattgaagaagcgaccgagaccatggtctcacgcctctccaaaaccaagaccaac
gcggagttcctcaaactgatctcccgctaa
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