Actomonas aquatica: K1X11_009525
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Entry
K1X11_009525 CDS
T09911
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aaqw
Actomonas aquatica
Pathway
aaqw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aaqw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K1X11_009525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaqw03021
]
K1X11_009525
03400 DNA repair and recombination proteins [BR:
aaqw03400
]
K1X11_009525
Enzymes [BR:
aaqw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K1X11_009525
Transcription machinery [BR:
aaqw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K1X11_009525
DNA repair and recombination proteins [BR:
aaqw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K1X11_009525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
WRQ89649
LinkDB
All DBs
Position
complement(2429892..2430896)
Genome browser
AA seq
334 aa
AA seq
DB search
MPKRLGKFELPNKLTKVEEGSTATYGKFIAEPFEAGYGHTIGNSLRRVLLSSIEGAAIAS
IKIEGVNHEFQSVDGIVEDVTDIVLNLKKVLIVSTANRDEVVLGIKVDREGPVTAADIQA
DANITIVNPEQVICTIDKAQPFEAEITVKTGRGYCPGELNKKEDQAIGVIPIDSLFSPVK
LVKYAVENTRVGQITDYDKLILEVWTDGRITPDDALKQAGSILKHHLDVFDRVSEETYEF
DNQQSEVSEEQNKLRKLLNMSVNEIELSVRAANCLNNANITTVGELAMKTEQEMLKYRNF
GKKSLNEIKEKLEALGLSLGMKFDERLLDSKKEI
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgcctcggtaagttcgaactccccaacaagctcacgaaggtggaggaaggc
tccaccgccacctacggcaagttcatcgccgagcctttcgaggccggttacggtcacacc
atcggtaactccctgcgtcgcgtgctgctgtcctccatcgagggtgctgccatcgcctcc
atcaagatcgaaggcgtgaaccacgagttccagagcgtcgacggcatcgtcgaggacgtc
accgatatcgtgctcaacctcaagaaggtgctcatcgtttcgaccgccaaccgcgacgaa
gtggtgctcggcatcaaggttgaccgcgaaggccccgtcaccgcggccgacatccaagcc
gacgccaacatcaccatcgtcaatccggagcaggtcatctgcaccatcgacaaggcccag
cctttcgaagccgagatcacggtgaagaccggtcgcggctattgcccgggcgagctcaac
aagaaggaagatcaagccatcggtgtcatcccgatcgactcgctcttctccccggtgaag
ctcgtcaagtatgccgttgagaacacccgcgtgggtcagatcaccgactacgacaagctc
atcctcgaggtctggaccgacggtcgcatcaccccggacgacgccctcaagcaagccggc
tcgatcctcaagcaccacctcgacgttttcgatcgcgtgtccgaggagacctacgagttc
gacaaccagcagtccgaggtcagcgaagagcagaacaagctccgcaagctcctcaacatg
tcggtcaacgaaatcgaactctccgttcgtgcggccaactgcttgaacaacgcgaacatc
accacggtcggcgaactcgccatgaagaccgagcaggagatgctcaagtatcgcaacttc
ggtaagaagtcgctcaacgagatcaaagagaagctcgaggccctcggcctttcgctcggc
atgaagttcgacgagcgcctcctcgactcgaagaaggaaatctaa
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