Actomonas aquatica: K1X11_019595
Help
Entry
K1X11_019595 CDS
T09911
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aaqw
Actomonas aquatica
Pathway
aaqw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaqw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K1X11_019595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaqw03019
]
K1X11_019595
Enzymes [BR:
aaqw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K1X11_019595
Messenger RNA biogenesis [BR:
aaqw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K1X11_019595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
AAA_30
AAA_19
AAA_22
Flavi_DEAD
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
WRQ87024
LinkDB
All DBs
Position
5140186..5141829
Genome browser
AA seq
547 aa
AA seq
DB search
MFKKIIAALRGTKASASDAPAPQKGKSPSSSKSSAPSGERKPRSEGTQGDAPKRKRGNRG
GRGEGAPAGDGDQQGQGQREGGRGRGRGRGGRGGRDGDRGEKRGGGREGRGGRGGRGRGE
GRRERPERDDFEHPRSEPIKPVTPIDIPAQDTEFSKLGLNDALAYSVAEKGYESPTPIQA
QAIPQVLAGRDVIGSAQTGTGKTAAFALPILQRLGAHGKMRCLVLEPTRELALQVEEAFQ
MYSKYTDLTTTIVYGGVGYGKQREDLRRGVDVCAATPGRLLDLLEDGSTHLNDIEIVVLD
EVDRMLDMGFLPDVRRIVEKCPRSRQTLFFTATLPPEIASLADWALTNPVEVKIGVQRKP
AETVSHAFYPVVAPQKFSLLLELMKRTDFKSVIVFTRTRMGADRIARQLKKEDHTVGVLH
SDRSQRERVEALQGFKSGKFEVLVATDIAARGLDIAGVSHVINYDVPENPEDYVHRIGRT
GRAQTSGDAFTLVTEDDVRYARSIERFIGAEVERKRIDDFDYIYSALFDPNAQQAAAPAV
RKSRLRR
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaagattattgcggcgttgcgcggcaccaaggccagcgcgtccgatgcgccg
gccccccagaagggcaaatccccctcctcctccaaatcctccgccccctccggcgagcgc
aagccgcgctccgagggcactcagggcgatgcacccaagcgcaagcgcggcaaccgcggt
ggtcgcggtgaaggcgctcccgccggcgatggcgaccagcagggtcaaggtcagcgtgaa
ggcggccggggtcgtggtcgcggccggggtggtcgcggtggccgggatggcgatcgcggc
gagaagcgtggcggtggtcgtgagggtcggggcggtcgcggtggtcgcgggcgcggcgaa
ggccggcgcgaacgtccggaacgcgacgattttgagcatccgcgcagcgagccgatcaag
ccggtgacgccgatcgatattcccgcgcaggatacggaattttccaaactgggcctcaac
gatgcgctggcctactcggtggccgagaagggctacgagtccccgaccccgatccaggcg
caggcgatcccgcaggtgctggccggtcgcgacgtgatcggttcggcgcagaccggcacc
ggcaagacggcggcttttgcgttgcccatcctgcaacgtctcggggcgcatggcaaaatg
cgctgcctcgtgctcgagccgacccgcgagctcgcgctgcaggtggaggaagcgttccag
atgtattccaaatacaccgacctcaccacgacgatcgtgtatggtggtgttggatacggc
aagcagcgcgaggacctgcgccgcggcgtggacgtctgcgccgcgaccccggggcgtctg
ctcgacctcttggaggacggttccacccacctcaacgacatcgagatcgtggtgctcgac
gaggtcgaccgcatgctcgatatgggcttcctgcccgacgtgcgccgcatcgtcgaaaag
tgcccgcgctcgcgtcagaccttgttcttcaccgccaccctgccgcctgagatcgcctcg
ctggcggactgggcgctgaccaatccggtggaggtgaagatcggtgtgcagcgcaagccg
gccgagacggtgtcccacgcgttttatccggtggtggctccgcagaagttcagtctgctg
cttgagctgatgaagcgcaccgatttcaagagtgtgatcgtcttcacccgcacccgcatg
ggcgcggaccgcattgcgcggcagttgaagaaggaagaccataccgtcggcgtgttgcac
tcggaccgcagtcagcgtgagcgcgtggaagcgttgcagggcttcaagtcgggcaaattc
gaagtgctggtggcgaccgacatcgccgcgcgtggtttggacatcgcgggcgtgtcgcac
gtgatcaattacgacgtgccggagaacccggaagactacgtgcaccgcatcggtcgcacg
ggtcgtgcgcagaccagcggtgacgccttcaccctagtgaccgaagacgacgtgcgttac
gcgcgctcgatcgagcgtttcatcggtgccgaagtggagcgcaagcgtatcgacgacttc
gactacatctactcggccctgtttgaccccaacgctcagcaggcggccgccccggcggtg
cgcaagtcgcgcctgcgccggtaa
DBGET
integrated database retrieval system
