Actomonas aquatica: K1X11_021895
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Entry
K1X11_021895 CDS
T09911
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aaqw
Actomonas aquatica
Pathway
aaqw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaqw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K1X11_021895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaqw03019
]
K1X11_021895
03009 Ribosome biogenesis [BR:
aaqw03009
]
K1X11_021895
Enzymes [BR:
aaqw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K1X11_021895
Messenger RNA biogenesis [BR:
aaqw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K1X11_021895
Ribosome biogenesis [BR:
aaqw03009
]
Prokaryotic type
rRNA helicases
K1X11_021895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UTP25_NTPase-like
CMS1
SWI2_SNF2
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WRQ87476
LinkDB
All DBs
Position
5730373..5732088
Genome browser
AA seq
571 aa
AA seq
DB search
MEKRKFAELGLSDEVLKAVDRMGFEEASPIQTAVIPLLLEGRDVVGQSATGSGKTAAFAI
PAIERVDPKLKRVQVLILCPTRELAVQVAEEVAKLASGKRGVMEVPIYGGQSYERQYRAL
KAGAQIVIGTPGRVMDHMERGTLSLDSLKMVILDECDRMLDMGFRDDIEQVLSATPPERQ
SLFFSATLPPQIRGLINRYTNNPESVKIAAKAQNAPRVEQIYFEVNRRSKIEALTRLIDL
HDFRHGIIFCSTKIMVDELDEHLHARGYQTDRLHGDITQAQRNRVTEKFKKRGFEFLVAT
DVAARGLDVDDLEVVFNYDLPNDAEDYTHRVGRTGRAGKSGMAFTFVSGREVYKLQGMMR
YGNLKIRRENLPSLDQVEEARENAFFEKLRGTLEEGKYRKYDRLIDRLLDQGYASTDIAS
ALIHQMTAHNDEKRQEVEHAAGFGREERGGGGGSGRGGDRGGERFERGGGRGGDRHEKPS
FDRPGRTGRESGFTTLFFNVGRKNLVQPGDLVGKIGGVTRLPINVVGAIDIKQRHSLVDV
ANDAVDTVLQKMAGVRMKGQVLQPIPAQDAE
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacgtaaatttgccgaactcggactcagcgacgaagtgctcaaagccgtcgat
cgcatgggttttgaagaggcgtctccgattcaaaccgcggtcattccgctgctgctggaa
ggccgcgatgtggtgggccagtcggcgaccgggtcgggcaagacggcggcgtttgcgatc
ccagcgatcgagcgggtggacccgaaactgaagcgcgtgcaggtgctcatcctgtgccca
acgcgtgagctggcggtgcaggtggcggaagaggtggccaagctcgccagcggcaagcgc
ggcgtgatggaggtgccgatttacggtgggcaaagttacgagcgccaataccgcgcgctg
aaggcgggcgcccagatcgtgatcggcacgccgggccgcgtgatggaccacatggagcgc
ggcaccttgtcgttggacagcctgaagatggtgatcctcgacgagtgcgaccgcatgctc
gacatgggtttccgcgacgacatcgagcaggtgttgtcggccacgccgccggagcggcag
tcgttgttcttctcggccacgttgccgccgcagattcgtgggctaatcaaccgctacacc
aacaacccggagtcggtgaagatcgcggccaaggcgcagaatgcgccgcgggtggaacag
atctattttgaagtgaaccgccgttcgaagatcgaggcgctgacgcgtttgatcgacctg
cacgatttccggcacggcatcattttctgttcgaccaagatcatggtcgacgagctcgac
gagcacctgcacgcgcgcggttatcaaacggatcgcctgcacggtgacatcacgcaggcg
cagcgcaatcgcgtgacggagaagttcaagaagcgcggctttgagttcctcgtggcgacg
gatgtggcggcgcgtggtttggacgtcgatgacctcgaagtggtcttcaactacgacctg
ccgaacgatgccgaggactacacgcaccgcgtgggccgcaccggccgcgccggtaagtcg
ggcatggccttcaccttcgtgagcggccgcgaggtctacaaactccaaggcatgatgcgc
tacggcaacctgaagatccggcgcgagaatctgccgtcgctcgatcaggtggaagaggcg
cgcgagaacgcgttcttcgagaagctgcgcggcaccttggaggaaggaaagtatcgcaaa
tacgatcgccttatcgaccgcctgcttgaccaaggttacgccagcaccgacatcgcctcg
gcgctcatccaccagatgaccgcgcacaacgacgagaagcgccaagaggtggagcacgcg
gcgggcttcggtcgcgaggagcgcggtggtggcggtggcagtggtcggggaggcgaccgc
ggcggcgagcgttttgagcgcggtggaggtcgcggtggcgatcgccatgaaaagccgagt
ttcgatcggccgggtcgcaccggacgcgagtcgggtttcacgacgctgttcttcaacgtg
ggccgaaagaacctggtgcagccgggtgacctggtgggcaagatcgggggcgtgacgcgc
ctgccgatcaacgtggtcggcgcgatcgacatcaagcagcggcactcgctggtcgacgtg
gcgaatgacgcggtcgacacggtgctgcagaaaatggccggcgtgcggatgaaggggcag
gtgttgcagccgatcccggcgcaggacgcggagtag
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