Acetohalobium arabaticum: Acear_0079
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Entry
Acear_0079 CDS
T01290
Name
(GenBank) RNA-metabolising metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
aar
Acetohalobium arabaticum
Pathway
aar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Acear_0079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aar03019
]
Acear_0079
Messenger RNA biogenesis [BR:
aar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Acear_0079
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
ADL11630
UniProt:
D9QSU2
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All DBs
Position
complement(82649..84322)
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AA seq
557 aa
AA seq
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MTENLDRIGIIQLGGKGVVGSNMIAVEYQNEILVLDAGIMFPTDNMPGVDYVIPDITYLQ
ENKQQVKALLLSHGHEDHIGAVPFLISEINIPIYGTELTIALVKEKLKENKLLHKTELNQ
VQPREKTKINNFQIQFINVSHSIPDAAAISITTPVGQILYTGDFKIDQNPINDDLTDFYK
LAHLGEEGLLALLSDSTNAEQKGYSRSESSIGKSLQDQFRTAQGKIIAAAFSSHIHRLQQ
VVSIAKEYDRKVAISGRSMIKTVKIARKLGHLDLPAEMLIDINDIDKYNPEQVVILMTGS
QGEPMAALTRIARGDHRQIEVTPQDTVIISATPIPGNEVAVSNTINQLLETGADVIYYSH
DHIHVSGHGFQEELKLMLNLTKPQYFIPVHGEYRHLHHHALLAQEIGIPKENIFVTPNGI
KLELTKDEAKITDKVPTGKILIDGSQTGSLDNTVLEDRQSLSEDGIITVMVTIDRETDRI
IGGPDLTSRGVTYQQNSQTETLLNKAKSKVAKILDRADIENIDQNSKLKSRIKAGINSLL
RKHLNSNPVILPLIMEV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaatctagatagaatcggtattattcaattaggcggcaaaggtgtagtcggc
agtaatatgatagcagttgaatatcaaaatgaaattttagttctggatgccggaattatg
tttccgactgataatatgcctggggttgactatgttattccagatataacctatttacag
gagaataaacagcaggtaaaggcattattactaagccacggtcatgaagaccatattgga
gcagtgccttttctgatttcagaaattaatataccaatctatggtactgaattaaccata
gccttagttaaagaaaaattaaaagaaaataaactgcttcacaagacagaattaaatcaa
gttcaacctagagagaaaaccaaaataaataactttcaaatccaattcatcaatgtcagc
cacagtatacctgatgctgctgctatatcaatcacaactcctgtaggacagattctatat
actggtgactttaagattgaccaaaatccaatcaatgatgatttaactgatttttataag
ctggcccacttaggagaagaaggattattggctcttctatcggatagcaccaatgcagaa
cagaaaggatatagcagatccgaaagctctatcggcaaatctctgcaggatcaatttcga
actgcccaaggaaaaatcattgctgctgccttttcgagccatattcaccgactgcagcaa
gtagtttcaatagctaaagaatatgatagaaaagtagccatcagcggtagaagcatgatt
aagactgtcaaaattgccagaaagttaggccatctggatttacctgctgaaatgttaata
gatattaatgatattgataaatataatccagagcaagtagtaatcttgatgaccggaagt
cagggtgaaccaatggcagccttaactagaattgcccgcggcgaccatcgccagattgaa
gttactcctcaggatactgttattatttcagctactcccatccccggcaatgaagtagct
gtcagtaataccattaatcaactgctggagactggggccgatgttatctattacagccat
gaccatatccatgtttctggccacggctttcaggaagaattaaagttaatgcttaattta
accaaaccccaatacttcattcctgtccatggtgagtacagacacttacatcatcatgct
ctattagcccaagaaattggaattcccaaggagaatatctttgttactcccaacggcatc
aaacttgaattaacaaaagatgaagccaaaataacagataaagttcctaccggtaagata
ttaattgatggttctcaaaccggcagcttggataatactgttttagaggaccgtcaatct
ttaagtgaagatggaattataactgttatggttactatcgatagggaaaccgatagaata
atcggaggacctgatcttacttctcgaggggttacttatcagcagaactcccagacggaa
actcttctgaataaagccaaatctaaagtagccaagatcttagatagagccgatatagag
aatattgaccagaattctaaattaaaatccagaatcaaagccggtatcaactccttatta
cggaagcatttaaacagcaatcccgtaatcctgcctttaattatggaagtttaa
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