Acetohalobium arabaticum: Acear_0320
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Entry
Acear_0320 CDS
T01290
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
aar
Acetohalobium arabaticum
Pathway
aar02020
Two-component system
aar02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Acear_0320
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Acear_0320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aar03021
]
Acear_0320
Transcription machinery [BR:
aar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Acear_0320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_12
HTH_Crp_2
HTH_32
Arg_repressor
HTH_21
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ADL11869
UniProt:
D9QU76
LinkDB
All DBs
Position
345619..347010
Genome browser
AA seq
463 aa
AA seq
DB search
MKLTPEISLEQKQELIMTPKLQQAIELLQLSKLELNQRLEQEMLENPVLERAEEEGEEVE
EDLTDEFEDVDWEDYFVDSSSNYKVNNYDQDEDEYNYENFVSASLTLEEHLLHQLHLLQL
SSQQIKIGEYIIGSLDNNGFLDTSITQLSKELKVEESGVEEVLAKIQQFDPTGVAAKDLQ
DSLLIQIDNLVLEAEKKELMNKIVTDHFELVSKNQLRKLSKELSIGLEKIQQLVDLIKML
HPNPANLYTKEVDTKYIEPDLIVEKINGRYVVTMEQDSTPRLRINAYYQKLLKKFKSDAK
AKEYLQEKINSALWLIKSIEQRRMTIYRIAEVIVDLQQEFLERGLKYLRPMTMQDVAEEI
DMHESTVSRATTSKYIQTPRGLFELKFFFSPGLETKTGEVFSAISIKKMIKDILAKEDKK
KPLSDQKIADKLEERGVEVSRRTVSKYRNELEIPSSTQRRRYS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaactcctgaaatatctttagagcagaagcaagagctgatcatgactcctaag
ctgcagcaggctattgaattattacagctatccaaactggaattgaaccagcgtttagaa
caggagatgttggagaatcctgttttagaaagggcagaggaagaaggtgaagaggtagaa
gaagatctgacagatgaatttgaagatgtagattgggaggattattttgtagactccagt
tcgaattataaagttaataattatgatcaagatgaagatgagtataactacgaaaatttt
gtttcagcttcgcttacgcttgaagaacatttactccatcaactacatttattacagcta
agctctcaacagataaagattggagaatatattatcggttcccttgataataatggcttt
ttagatacttctataactcaattaagtaaggaattaaaagtagaggagagtggggtagaa
gaggttttagctaagatccaacagtttgacccaaccggagtggcagctaaggacttacag
gattctcttttaattcagattgataatttggtattagaggctgagaagaaggaattaatg
aataaaattgtaactgatcactttgaattagtaagtaaaaatcagcttcggaaattatct
aaagagttgagtattggtcttgaaaagattcagcagctagttgatttaataaagatgctg
catccgaatccggctaatctatatactaaagaggtagatactaaatatattgaaccggat
ttaatagttgaaaagattaatggtagatatgtagtaactatggaacaggattctactcct
cggcttagaattaatgcttactatcaaaagttattaaagaagtttaaatcggatgctaag
gctaaagaatatcttcaggaaaagattaactctgctctctggttaattaaaagtattgag
cagcgaagaatgacaatttatcgcattgctgaagtaattgttgatcttcagcaggagttt
ttagaacgaggtctgaagtatctgcgtccgatgacaatgcaggatgtagctgaagagatt
gatatgcatgaatcaactgtcagccgggctactaccagcaaatatatacagactcctcgc
ggcttatttgaattgaaattcttcttttcaccaggacttgaaactaagactggagaggta
ttttcagcaatcagtattaagaaaatgatcaaggatatattagctaaagaggataaaaag
aagcctttgagtgatcaaaagatagctgataagctagaggagaggggagttgaagtatca
cgccggacagtttctaagtatagaaatgaattagaaattccctcttctactcagcggaga
agatatagttaa
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