Acetohalobium arabaticum: Acear_0716
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Entry
Acear_0716 CDS
T01290
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aar
Acetohalobium arabaticum
Pathway
aar03410
Base excision repair
aar03430
Mismatch repair
aar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Acear_0716
03430 Mismatch repair
Acear_0716
03440 Homologous recombination
Acear_0716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aar03400
]
Acear_0716
DNA repair and recombination proteins [BR:
aar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Acear_0716
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Acear_0716
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Acear_0716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
Helicase_C
DEAD
DHHA1
HIRAN
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ADL12256
UniProt:
D9QVJ7
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All DBs
Position
776820..780452
Genome browser
AA seq
1210 aa
AA seq
DB search
MILDREWKLLNRSTEEEPNLSDSLNISSVLAEILSSRGLNSKQKVENFLEVELDGLHSPF
LLEGIEQAVDRISTAMESQEIIGIYGDYDVDGITSTGLLINYFQHLGVEPKYHIPNRLEE
GYGLNKDAIESLAQSGVELLITVDCGISDYQEVKYANQLGIDVIITDHHEVPARIPPAEA
VINAKQSNCNYPFSQLCGAGVAYKLILALADKDQQVNQKEIKEYYLDLLAMGIVADIVPL
VDENRIMVKYGLELLQNPNNLGLSALIEAVDLTETEINTGHIGYILAPRLNAAGRIGNPD
LALELLITDDPSQAADIAAELEEINHRRRDIEADIRQEAELMVEGMDLEQTKALVLASEN
WHSGVVGIVASDIQEKYYRPTIMIAIEDDGIGRGSARSIKGFNIYQAVKNSEDLLPKFGG
HEQAAGLSIAKEDIAQFRDEINQYADDRLSDKDLTPRLKLDCEVELSELSKELVQEIDYL
APFGFGNPRPKLAVREVTVADFATVGSNGEHLKLAVTDEAGTTVECIGFNMAGFRQKLIS
QQEEIDLACTVEINNWQGKSELQLKLKDINFPEVSFIDQLFAKSKEIIADNYYRGIGEED
QFYTKVVGVTFEGRQELIKELKRGDKLNLVREPENEYDESAIRVETTDQEQIGYLKSGLA
KHLAPYLDVGFEYQVTVSEVTGGVDKNLGVNIFIEQAGYKEAESAEEAKSCRAQLETLNR
SEILNEVRQALIGDYDFRSKQKEVLTTLDNDQDTLAIFGTGRGKSAIFQSYAALQALNQG
RITVILYPLRALVNDQFDSLKKNLAPLGLDIYKANGSLSVGEREKLITALNHGELDIVLT
TPEFMEYHLDKFQNLADEIGFLVVDESHHIGMASSSFRPTYKRLGKLNSKLGNPLVLAVT
ATANNQVAREIIETLNIGEIIIDPHVRSNLEIIDKRGCRDKEAYLYEVASSGEKSIIYVN
SREQSIELASNLRQRLPGLAEEIGFYNAGLTNKERNRIESMFWSGKLKIIVSTSAFGEGI
DIPDIRNIVLYHLNFNLTEFNQQSGRVGRDGKQAKIHLLFGQQDVRINEFILDSMAPERE
VLVQLYCVLKQEEDTDQQIKLTNQQLAQKVSSRLQGKVRENTVSAGLGVLEDLNILTRIQ
EAGNRIIQLRRIPDSQLDLNDSLRYREGLEDKEAFNEFKDFILNAEAEELLSLVNQPIYP
TKLVKTKGEN
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
ttgattttggatagagaatggaaattattaaaccggtcaacagaagaggagccgaattta
agtgattccctaaatatttcatcagtactagcagagattctatccagtagaggattgaat
agcaaacagaaggttgagaactttttagaagtggagttagatggactccattctcctttc
ttgctggagggaatagagcaggcagtcgatagaatctcaaccgcaatggagtctcaagag
attatcggtatctacggcgactatgatgttgatggaattaccagtaccggactgcttatt
aattactttcaacatttaggagttgagcctaagtatcatattcccaatcgtctagaagaa
ggatatggcctcaataaagatgctattgagagcttggctcagagcggagttgagctttta
attacagttgactgcggtattagtgattatcaagaagtaaaatatgctaatcaattgggg
atagatgtaattattactgaccatcacgaagtaccggcccggattccacccgctgaagca
gtcataaatgctaaacagagtaattgtaattatcctttctctcagctttgtggagcagga
gttgcctataaattaattctagcgctggctgataaggaccaacaggttaatcagaaagaa
ataaaagaatattatttagatttattagctatgggaatagttgctgatattgtgccgtta
gtagatgagaataggattatggttaaatatggtttggagttgctgcagaatccaaataat
ttaggtttgagtgctttaattgaagcggttgatttaacagaaactgagatcaataccggc
catatcggctacattttggcacccaggctgaatgctgccggccgaatcggtaatccggat
ctggctttagaactattaattaccgatgatccttctcaggcagccgatattgctgctgaa
ttggaggaaattaatcaccggcggagagatatagaggctgatatacgccaagaggcagaa
ttaatggttgaaggaatggacttagagcagactaaagcgctggttttagcttctgaaaat
tggcattctggagtggtagggattgtagcttctgatattcaggagaagtattaccgtcct
acgattatgattgccattgaagatgacggcatcggcaggggttcagcccgaagtattaaa
ggcttcaatatttatcaggcagttaagaattctgaagatctgctccctaaatttgggggt
catgaacaggcggctggattgagtattgctaaagaggatattgctcaatttagggatgag
attaatcagtatgccgatgatagactgagtgataaggatttaactccgcggttaaagctg
gattgtgaagttgaactgtcagagctaagcaaggaattagtccaggagatcgattattta
gccccctttggtttcggcaatccgcggcctaaactggctgtcagggaagttacggtagct
gattttgcgacagtgggctcgaatggtgaacatttgaagttagctgttacagatgaagcc
ggtactactgtggaatgtattggctttaatatggctggtttcagacaaaaacttatctcc
cagcaggaagagatagatttggcctgtacagtagagatcaataactggcaggggaagagt
gaattacagttaaagcttaaagatattaactttcctgaagtttcatttatagatcaatta
tttgccaaatcaaaagagattattgctgataattattaccgaggtattggagaggaagac
cagttttataccaaagtagtaggagttaccttcgaaggtcgtcaggagttaattaaagag
ttaaagagaggagataagcttaatttagtaagagaaccggagaatgaatatgatgagtct
gccattcgagtagagactactgatcaagagcagattggctatcttaagtccggtctagcc
aaacatttggccccttatctcgatgtcggctttgaatatcaggtgactgtttcagaagta
accggaggagtagataaaaatttaggtgttaatatctttattgagcaggcaggttataaa
gaagcagagtcagccgaggaagcaaaatcttgtcgggcccagctggagacattaaaccgc
agtgagattctaaatgaagtacgccaggcgttgattggtgattatgattttagaagtaaa
cagaaagaggtcttaactacactggataatgaccaggatactttagccatttttggtacc
ggacgtggtaaatcggctatcttccagagttatgctgctttgcaggccttgaatcaaggc
cgaataacagttatactatatccactgcgggcattggtcaatgatcagtttgacagcctg
aagaagaatttggcaccattaggattagacatctataaggctaatggttctttaagtgtt
ggtgaacgagaaaagttgattactgctttgaatcacggggaacttgatattgttttaaca
actcctgaatttatggagtatcatttagataagtttcagaatttagcagatgaaatcgga
tttttagtagttgatgaaagccatcatatcggtatggcttccagttctttcagacctact
tataaacgtttgggcaaattgaattctaaattaggtaatccgctggttttagctgttaca
gctactgctaataatcaggtagccagagagattatagaaactttgaatattggagagatt
attattgatccgcatgtacgtagtaatctagaaataattgataagcggggctgcagagat
aaggaagcatatctttatgaggtggcaagcagtggtgaaaagagtattatctatgttaac
agccgggagcagagtatagagctagccagcaatttaagacagcgactgcctggtcttgcc
gaggagattggcttttataatgctggactgacaaataaggaacgaaaccggattgaaagt
atgttctggagcgggaaattaaagataatagtttctaccagtgcttttggagaaggaatt
gatattcctgatattagaaatatagtactgtatcaccttaattttaatttaactgaattc
aaccaacagagtggacgcgtcggcagggatggtaaacaggccaagattcatctacttttt
ggccagcaggatgtccggattaatgagtttattctggatagtatggcaccagaaagagaa
gtcttggttcaattatactgtgtattaaaacaggaagaggatacagaccaacaaataaag
ttaaccaatcagcagttagcccaaaaagtcagcagtcggctgcagggtaaagtcagagag
aatacagtttctgctggtttaggagttttagaagatttaaatatattaaccaggattcag
gaggcaggaaatagaataattcaattaagaaggattcctgattctcaactggacttaaat
gattcactgcggtatagggagggattggaggataaagaagcctttaatgaattcaaagac
tttattctgaatgcagaagctgaagaattattatctttagttaatcaacctatctatcca
actaaattagtaaagactaagggggagaattaa
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