Acetohalobium arabaticum: Acear_2058
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Entry
Acear_2058 CDS
T01290
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aar
Acetohalobium arabaticum
Pathway
aar03420
Nucleotide excision repair
aar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Acear_2058
03430 Mismatch repair
Acear_2058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aar03400
]
Acear_2058
Enzymes [BR:
aar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Acear_2058
DNA repair and recombination proteins [BR:
aar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Acear_2058
MMR (mismatch excision repair)
Other MMR factors
Acear_2058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
DUF3553
NPHP3_N
Vps39_1
Motif
Other DBs
NCBI-ProteinID:
ADL13548
UniProt:
D9QT48
LinkDB
All DBs
Position
complement(2156078..2158201)
Genome browser
AA seq
707 aa
AA seq
DB search
MEILDGLNPQQKKAVKHKDGPLLVLAGAGSGKTMVLTHRIAYLIQQCNVEPYNLLAVTFT
NKAAEEMRERIEKLIAQDSEDIWMSTFHSIAVRILRREINKLGYDRNFTIYDTTDQQALI
KDIIKNQLDLDPKQFKPRSVLNQISNAKNDLIDVSAFQQGVGSYFERVVGEIYESYQQQL
KENNALDFDDLIMKTVELFEEYELVLEYYQNRFRYILVDEYQDVNHAQYRLINLLAEDHK
NICVVGDDDQGIYGFRGADISNILDFEEDYSQTEIIKLEQNYRSTERILDAAYEVVRNNR
GRKPKKLWTENDQGAPIKQYKARGETEEAEYITEEIMKLREEEALDYDDFAVLYRTNAQS
RVLEEVFRKQGIPYRIIGGLKFYERKEIKDILAYLRVLYNPSDDICLQRIINVPKRGIGA
TTVGRLNNFAAQHNISLYEAVQRVEEIDSINSRCSGQVRRFNELMSYFRQRADELNALEL
TKELLDETDYLKNLRQEDTDQARSRIENIKELLTDIEEYIEQEGDITLGGYLEEVALITD
VDNLEAEASAVVMMTLHSAKGLEFPVVFLSGMEEGLFPHSRSFDDKEAIEEERRLCYVGM
TRAEEKLYLTHALSRKIYGQRSYNPVSRFIEEIPQQLFCTNEENEQQHSDKSQPEYTVGD
QVKHPEWGTGRIVNTEASGQDLQVAVAFPDQGIKKLLVAYASLEKVN
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggagattctagatggtttaaaccctcagcagaagaaagctgttaaacataaagatgga
ccgctgttggttctagctggagccggtagcggtaagactatggttttaacacatcgaata
gcatatttaatccaacaatgtaatgttgaaccttataatcttttagcagttacctttacc
aataaggctgctgaggagatgcgggagagaatagagaaattgattgctcaggatagtgaa
gatatctggatgagcacctttcattcaattgctgtccgtatcttaaggcgggagattaat
aaattaggctatgaccgaaactttactatctatgatactactgatcaacaggctttaatt
aaggatataattaagaaccagttagatctggacccaaagcagtttaagccgcggtcagtt
ttaaatcagatcagtaatgctaaaaatgatttaatagatgtatctgcttttcagcaggga
gttggtagttactttgaaagagtggttggagaaatttatgaatcataccaacagcagctt
aaggagaataatgctttagattttgatgatctaattatgaagacagtagagctgtttgaa
gagtatgaattagttctggagtattatcagaaccgctttcggtatatcctagtcgatgag
tatcaagatgttaaccatgctcagtatagactaattaatctactggctgaagaccataaa
aatatctgtgtagtaggtgatgatgatcagggaatatatggttttcggggggcagacatc
agtaatattttggacttcgaagaggattattctcagacagaaattattaaattagaacag
aattatcgatctacagaaagaatactggatgcagcctatgaggtagtgcggaataatcgc
ggccgtaagcctaagaagctgtggactgaaaatgatcaaggggctcctatcaagcagtat
aaggcgcggggtgaaacggaagaagcagaatatattactgaagaaattatgaagcttagg
gaagaagaagctttggattatgatgactttgctgtgttataccggactaatgcccaatca
agggtgttagaggaagtatttaggaaacaaggaattccctatcgtataatcggagggctt
aaattctatgagcggaaagagattaaagatatcttagcttatctaagagtgctttataat
cccagtgatgatatctgcctccagcgaatcattaatgttcctaagcgaggaataggagct
acaactgtgggccggttgaataattttgctgctcaacataatatcagtctttatgaagca
gttcagcgagtcgaggaaatagattctattaacagccgctgtagtggacaggtaagaaga
tttaatgaactgatgtcttattttagacagagagctgatgaacttaatgctttagagctg
actaaggaattattggatgaaactgattatctaaagaatttacgacaagaggatactgac
caggcccgcagtcgaatagagaatatcaaagagttattaacagatattgaggaatatatt
gagcaagaaggtgatattactctcggcggttacttagaggaagtagctttgattactgat
gtggacaatctggaagctgaagcatcagcggtagtaatgatgactctccatagtgctaaa
ggtctggagtttccggtagtctttttaagcggaatggaagaaggattatttccccactcc
cgctcctttgatgataaagaagcaattgaagaggagcggaggctctgttatgtaggaatg
acacgagcagaagagaagctatacttgacccatgctctatcgcgtaagatttatggtcag
cgctcttataatccggtgtctagatttatagaagagattccgcagcagttgttttgcact
aatgaagagaatgagcaacagcatagtgataaatcccagccggaatatactgttggtgac
caggttaaacatcctgaatggggaacaggtaggattgttaataccgaagcgagcggtcaa
gatttacaggtagcagttgcttttcctgatcagggaatcaagaagttattggtagcttat
gcttctttagaaaaagtgaattaa
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