Acetohalobium arabaticum: Acear_2238
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Entry
Acear_2238 CDS
T01290
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aar
Acetohalobium arabaticum
Pathway
aar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Acear_2238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aar03021
]
Acear_2238
03019 Messenger RNA biogenesis [BR:
aar03019
]
Acear_2238
Transcription machinery [BR:
aar03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Acear_2238
Messenger RNA biogenesis [BR:
aar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Acear_2238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
AAA_22
ATPase_2
AAA_25
AAA
S1CSD-TOTE-2
DUF3086
Motif
Other DBs
NCBI-ProteinID:
ADL13724
UniProt:
D9QU03
LinkDB
All DBs
Position
complement(2349684..2350940)
Genome browser
AA seq
418 aa
AA seq
DB search
MNIAELQEKTITELHEVAKDLEISGYTRLKKKELIFEILKAETENGGLIFAEGVLEILPD
GYGFLRPSKYLPSTDDIYISASQIKRFDLRTGDVVSGQVRKPKDNERYFALLRIEAVNYE
DPELASERAYFEDLTPLYPQERIVLEDNPSDVSTRLMDLIAPVGKGQRGLIVAPPKAGKT
VLLKKVANSIVKESPESKLMILLIDERPEEVTDMKRSVDAEVISSTFDEPPKNHIKVSEL
VLKKAKRLVEQKKDVVILLDSITRLARAYNVNVPSSGRTLSGGLDPTALHKPKRFFGAAR
NIEEGGSLTILATALVETGSRMDDVIYEEFKGTGNMELHLDRTLAEKRLFPAINVQLSGT
RKEELLLGDSELNTMWTLRREITDLSKSEVISSFIKHIKSTDSNQQMLNSLQKAFGKK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagctgaattgcaagagaagacgattactgaattacatgaagtagctaaagat
ctagaaattagtggttatacccgcttaaagaagaaggaattaatctttgaaattttaaag
gctgaaactgaaaatggaggtctgatttttgctgaaggggttttagaaatcctgcctgac
gggtatggtttcttacgtccttctaaatatctaccgagtactgatgatatctatatttct
gcatcacagataaagcggtttgatttaaggaccggtgatgtagtctccggccaggttaga
aaacctaaagacaatgagcgatattttgctttattgcgaatagaggctgttaattacgag
gatccagaattggcttcagagcgggcttattttgaagatttgactcctctctatcctcag
gagagaattgtattagaggacaaccccagcgatgtatcgactcgattaatggatttgata
gctccggtaggtaaaggacagcgcggattaatcgttgctcctcctaaggccggtaagaca
gtattgctaaaaaaggtagcaaatagcattgttaaagaatcaccggaatctaaattaatg
attctgctgattgatgaacgcccagaagaagtaactgatatgaagcggtcagtggatgcg
gaggtaattagttctacttttgatgagccgccgaagaatcatattaaagtttctgaactt
gtattaaagaaggccaaaaggttagtagagcagaagaaggatgtagttattcttttagac
agtattacgcgtttggctcgcgcttataatgtaaatgtaccttccagcggccgtacgtta
tctggtggtttagatcctacagcccttcataaaccgaagcgtttctttggagctgctaga
aatatagaggaaggcggcagtttgacgatcctggcgactgctttagtggagacaggaagc
agaatggatgatgtaatttatgaagaatttaagggtaccggaaatatggaacttcactta
gaccgaaccttggctgaaaagagactcttcccggctataaatgttcagctttctggaact
agaaaagaagagttattattgggagattcagagctaaatactatgtggacactgcgtaga
gagattactgatctttccaaatccgaggtaatcagctcctttattaaacatatcaagagt
actgattccaatcagcagatgttaaattccctccagaaggcctttggtaagaaataa
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