KEGG   Anopheles arabiensis: 120893676
Entry
120893676         CDS       T07381                                 
Name
(RefSeq) probable nucleoporin Nup54
  KO
K14308  nuclear pore complex protein Nup54
Organism
aara  Anopheles arabiensis
Pathway
aara03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:aara00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120893676
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aara03019]
    120893676
Messenger RNA biogenesis [BR:aara03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120893676
SSDB
Motif
Pfam: Nup54 Nup54_C PEARLI-4 ATG14 HEPN_Swt1 DUF1539
Other DBs
NCBI-GeneID: 120893676
NCBI-ProteinID: XP_040151633
UniProt: A0A182I1P2
LinkDB
Position
2:complement(100145984..100150326)
AA seq 628 aa
MSFNFGNTSALGSTSTPAKPAFGNFSFGGQTSTPAFGAPAATGATSAFGQPAATSAFGAT
AAAAPAFGAAPGTATTGTGAFGTLGFGGATGGTTTAFGATPASSAPTFGFGTNTATAATP
AFGGFGTATSTAGTGFGGFGATTATSTSAPAFGGFGATAQPFGSSIATTSAPSFFGGLGA
SQPQASTATGFGGFGTGNTFGASTFGQPAAGGLNFGQSAFGQQQQQQQLQQQQQLAQALS
PEEAFVQSVFNVSIFGDERDTVISKWNYLQAMLGTGKSFYSHNAPPVEITPSNFLCRFKT
MGYSKLPGRDNKTGLVGLTINKTVAQIKEQQQQFIASMNQIFGNKPNITIVVENVKSIND
TKVQVIIYIEEKSTISNEVKRVLATEVASYLNQPMPKQQLTQLGIESVVALVLPEEDQLK
EYLDNPPKGIDPRMWEQAKMDNPDPKRFIPVPMIGFQDLKWRIKCQENETEIHASYLAKV
EKEIAELKQRHMNTTAKIAEHRRNFAELSHRILRVIVKQESTRKLGLALSPEEEAIRTKL
ENMHALVSTPTQFRGRLSELLSQMRMQRNQWAHGNFLNEYTLDKDATQEMQSFLTMQQKA
VSFLIDTIHKDMKTLKIISEGMTQLVQS
NT seq 1887 nt   +upstreamnt  +downstreamnt
atgtcgttcaactttggaaacacatcggcgctcggctcaacgagcacgccggccaagccg
gcttttggcaatttctcatttggtggacaaacgtcgactccggctttcggtgcacccgcc
gccaccggtgcaacgtccgccttcggtcagccggcagccacgtccgcgttcggtgcaacg
gcggccgctgctcccgcattcggtgccgcgcccggaacggcaaccaccggcaccggcgcc
ttcggaacgctaggattcggcggggccaccggtggaacgacgacggcattcggagcgacc
cccgccagttcggcaccgacgttcgggttcggcaccaacactgctacagcggcaacaccc
gcgttcggtggattcggtacggccacatcgaccgctggtaccggattcggaggatttgga
gccaccactgccaccagcacgagtgctccagcgttcggtgggttcggcgcgaccgcacaa
ccattcggcagttcgatagcgaccacctccgccccatcgttcttcggtgggcttggagcg
agccagccacaagcaagcacggccaccgggttcggtggcttcggcactggcaacacgttt
ggtgcgtcgacttttggccagccggccgccggtggattaaactttggacagtcagcgttc
gggcagcagcagcaacagcagcagctgcaacaacaacagcagctcgctcaagccctctcg
cccgaggaagcgttcgtccagtccgtgttcaatgtgtccatctttggcgacgagcgggac
acggtcatttcgaaatggaactacctgcaggcgatgctcgggacgggcaaatcgttctac
tcgcacaatgcaccgccggtcgagattacgccgtccaactttctgtgccggttcaagacg
atgggctacagcaagctgcccggccgggacaacaaaaccggcctggtgggtttgaccatc
aacaaaacggtggcacagattaaagagcagcagcaacagttcattgccagcatgaaccaa
atctttggcaacaaaccgaacattacgatcgtggtggagaacgtcaagtcgatcaacgac
acgaaggtgcaggtcattatctacatcgaggaaaagtcaaccatctcgaacgaggtgaag
cgcgtgctggccaccgaagtggccagctacctcaatcaaccgatgccaaagcagcagctt
acccagctcggcattgagtcggtcgttgcgttggtgctgccggaggaggaccagctgaag
gagtatctggacaatccgcccaagggtatcgatccgcgcatgtgggaacaggccaagatg
gataatcccgacccgaagcgattcataccggtgccgatgattggttttcaggatctgaaa
tggcgcatcaagtgtcaggagaacgaaaccgaaatccatgcctcgtacctcgcgaaggtg
gagaaagagatcgccgagctgaagcagcggcacatgaacacgaccgccaagatagcggag
catcggcgcaactttgccgagctgagccaccgcatactgcgcgtcattgtgaagcaggaa
agtacgcgcaagcttgggctggcgctgtccccggaggaggaagcgatacggacgaagctg
gaaaacatgcacgcgctcgtgtccaccccgacccagttccggggccggctgagcgagctg
ctgtcgcagatgcgcatgcagcggaaccagtgggcacacggcaacttcctgaacgagtac
acgctggacaaggacgccacgcaggagatgcaatcgttcctgacgatgcagcagaaggcg
gtctcgttcctgatcgacacgatacacaaggacatgaaaacgctcaagatcattagcgag
ggcatgacgcagctggtgcagagctag

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