Anopheles arabiensis: 120895412
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Entry
120895412 CDS
T07381
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
aara
Anopheles arabiensis
Pathway
aara03440
Homologous recombination
aara03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aara00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120895412
03450 Non-homologous end-joining
120895412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aara03032
]
120895412
03400 DNA repair and recombination proteins [BR:
aara03400
]
120895412
DNA replication proteins [BR:
aara03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
120895412
DNA repair and recombination proteins [BR:
aara03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
120895412
BRCA1-C complex
120895412
NHEJ (non-homologous end-joining)
MRX complex
120895412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_15
SbcC_Walker_B
SMC_N
DUF3450
AAA_21
DUF724
PspA_IM30
AAA_29
ABC_tran
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
120895412
NCBI-ProteinID:
XP_040154688
UniProt:
A0A182I955
LinkDB
All DBs
Position
2:complement(40759112..40763517)
Genome browser
AA seq
1308 aa
AA seq
DB search
MSTINKLEIRGIRSFGVDRADVQQINFRSPLTLIVGQNGCGKTTIIECLKYGLTGEVPPG
TNRGVGFVHDPKIFNTVESLGQVKLMVKDFTGNTVTAIRSMKITHKGKNPKFETMDSTIT
MENAQTKEKVTMTRSRVTDINNEMCDAMGVSKAILNNVIFCHQEDSCWPLEEPKELKKKF
DAIFGTTEYNRVIDKLIKISKEYNEKLKEKQGDLKLLQNVKAQAETKQLQLEDGERNMAR
LTQMIGELEEDIRPIQSKLEQLALVERQYSSLLAKKIEFNSKIKSKHEQSQQLRSKINKL
FEGSLPELEMEVRIFQQTSASKRSELEDEEAELQRLKLQDRSLQSKLQSIDGQKIELAEK
QKRERELQIERGKKIRALGDKLSLSLVDDYGAASVSASVVEAALGSIRNALKAQEATVQS
KGKAFEEEDAQAQKRIDKLRETKATLESDCTSKRKQIEQLDREKLQTAREVAEIERSAET
LKRLIDEIDRLEQEYETQVTAADLPAKRKELAERKLLRDQLQDQLDKLDERISSLDAVAM
KEQELTLKEQQCTGREAELRRLRNKHGDSLRRLFPDRTIESNYKSNLQNLYDELQKEVKT
VNEKVRRSQATVTEMETTRKSQKQQLDRLERELADAEEKIYSACRGNAYEEVLAKLNEKI
QKNNMEHGEARSAVVLYQKFIANIENDRCCPVCEKGLESEDAHEVSGKLGDEIRRLPEKI
ETLERTLKKDRADYDKLLALKPISERLEKQRKELPQLKQQLQDTEKRLSTASDELEEYQL
AVSEPTANMQLINAIVGDMSVLDKLGSELERMKRGVEELRAQLGPNMAEGVTIESLKSER
EALRAKFKTERKLTDELQNTIDTKTEKLNNLQARNNQMKSKKLKLQESVQSLEQKRASVN
ELGAKIVTLEEEFKDAERRLTPVRQQLQQELEQKQRSKEQNNKELQRLRKGLEELRWEET
AIVRLSGELDDLAALNLGVELSRLQAKREQAQQEQDQLKRTMDGKAKSIEKLRQDIANQH
LQERDLLDNRDLKRLMRETADLEAELAALVKSMGEMEVCSVQKERDRLIDLRDELQARRS
ELNGQVGELQRQLNELRKELNRSEFRNAVRNYVTTLTESIVQRKIISDIKKYRDALESAL
REYHTEKMQEINRTIFSLWRDIYRGNDIDYIRINTVDDGVAERSDKRRAYTYGVVQAKND
VEIDMRGRCSAGQKVLASLIIRLALAETFSSNCGVMALDEPTTNLDRDNIDSLCESLRRI
VSEREGGHFLLIVITHDEEFVTKLEKFENYYRISRNSEGKSVIKEEQL
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgataaataagcttgaaatacgtggaatacgcagttttggagtggaccgtgcc
gatgtgcagcaaatcaatttccgctccccgctcacgctgatcgtgggccagaacggttgc
ggcaagaccaccatcatcgaatgcctgaagtacgggctgacgggagaggtgccgccgggc
acgaaccggggcgtcggcttcgtgcacgatcccaagatattcaacaccgtggagagcttg
gggcaggtgaagctgatggtgaaggattttaccggcaacacggtgacggcgatccggtcg
atgaaaatcacgcacaagggcaagaaccccaagttcgaaacgatggactcgaccatcacg
atggagaacgcccagacgaaggagaaggtcacgatgacgcggtcgcgcgtcaccgacatc
aacaacgagatgtgcgacgcgatgggcgtctcgaaggccatcctgaacaatgtgatattc
tgccaccaggaggactcctgctggccgctggaggagccgaaggagctgaagaaaaagttc
gacgccatcttcgggacgaccgagtacaaccgggtgatcgataagctgatcaagatcagc
aaggagtacaacgagaagctgaaggagaagcagggcgacctgaagctgctgcagaacgtg
aaggcgcaggcggaaacgaagcagctgcagctggaggacggcgagcggaatatggcaagg
ctgacgcaaatgatcggcgagctggaggaggacatccggccgattcagagcaagctggag
cagctggccctggtcgagcggcagtactcgtcgctgctagcgaagaagattgagtttaac
tccaagataaagagcaagcacgagcaaagccaacagctccgttcgaagataaacaaactg
tttgaaggatcgttgcccgagctggagatggaagtgcgaatctttcagcaaacgtccgcc
tcgaagcggtccgagctggaggacgaagaagcggagctgcagcgcctcaaactgcaggac
cgttccctgcaaagcaagctgcagtcaatcgatgggcaaaagattgagctcgccgaaaag
cagaaacgcgaacgggagcttcagatcgagcgaggcaaaaagattcgggcgcttggcgat
aagctttcgctctcgctggtcgacgattacggtgctgcttcggtcagtgccagcgtagta
gaggctgccctcggctcgatccgcaatgcgctcaaagcgcaagaagcgacggtccaatcg
aagggcaaggcctttgaagaggaagacgcacaggcacagaagcgcatcgacaagttgcgc
gaaacgaaagccacgctggagagcgactgcacctccaagcgcaagcagatcgagcagctg
gaccgtgaaaagctgcagacggctcgcgaagtggccgaaatcgagcgatcggccgaaacg
ctgaagcgactgatcgatgaaatcgatcggctcgagcaagagtacgaaacgcaggtcact
gctgcggatctgcccgcgaagcgcaaggagctggcggaaaggaagttgctgcgcgatcag
ctgcaggatcagctggacaagctggacgagcgcatcagctcgctcgatgcggtggccatg
aaggagcaggagctgacactgaaggagcagcagtgcaccgggcgggaggctgagctgcgc
cggctgcgcaacaagcatggcgacagcttgcggcgcctctttcccgaccgcacaatcgag
tcgaactacaagagcaatctgcaaaacctgtacgacgagctgcaaaaggaggtgaaaact
gtgaatgaaaaggtgcgccgctcgcaggccacggtgacggagatggaaacgacccgcaaa
agccagaagcagcagctcgatcggctggagcgtgagttggccgacgcagaggagaaaata
tacagcgcctgccggggcaacgcgtacgaggaggtgctggccaagctgaacgaaaagata
cagaaaaacaacatggagcacggcgaggcacggtcggccgtcgtgctgtaccaaaagttc
attgccaacatcgaaaacgatcgctgctgtccggtgtgcgaaaaggggctggagagtgag
gacgcgcacgaggtgagcggcaagctgggggatgagattcgacggctgccggagaagatt
gaaacgctcgagcggacgctcaagaaggatcgggccgattacgacaagctgctcgcactg
aaaccgatctcggagcggttggaaaagcaaaggaaggaactgccccagctgaaacagcag
ctgcaggatacggagaaacggctcagcaccgcatcggacgagctggaagagtaccagctg
gcggtgtcggaaccgacggcaaacatgcagctgatcaatgcgattgtcggcgacatgagc
gtgctggacaagctgggcagcgagctggagcgcatgaaacgtggcgtagaggagctgcgt
gcccagctggggccgaacatggccgagggcgttaccatcgagtcgctcaaatcggaacgg
gaagctttgcgcgccaagtttaaaacggagcgaaagctcaccgacgagctgcagaacacg
atcgatactaaaacggaaaagctgaacaatctgcaggctcgcaacaatcagatgaagtcg
aaaaagctgaagctacaggaatcggtccaatcgttggagcagaagcgcgcgtccgtcaac
gagctgggtgcaaaaattgtcaccctggaggaggaatttaaagacgccgaacggcgactc
accccggtgcggcagcagctgcagcaggagctagagcagaagcaacgctccaaggagcaa
aacaacaaagagctgcagcggttgcgcaaagggcttgaggagctgcgctgggaggaaacg
gcaatcgtacggctgagcggcgagctggacgatctggccgcactcaatttgggcgtcgag
ctgagccgactgcaggcgaaacgagaacaagcgcagcaagagcaagaccagctaaagcgc
acgatggacggcaaggcgaaaagcatcgaaaagctgcggcaagacatcgccaatcagcat
ctgcaggagcgggatctgctggacaatcgcgatctgaagcgtttgatgcgcgaaacggcc
gacttggaggcggaactagccgcgctggtcaagagcatgggcgagatggaggtgtgcagt
gtgcagaaggagcgcgatcggctcattgatctgcgcgatgagctgcaggcccgccggagc
gaactgaacggccaggtcggcgagctgcagcggcagctgaacgagctgcgcaaggagctg
aatcgcagcgagttccgcaacgctgtccgcaactacgtcacgacgctgaccgaatcgatc
gtgcagcggaagatcatcagcgacatcaagaagtaccgggacgcgctggaaagtgcactg
cgcgagtaccacacggagaagatgcaggagatcaaccggaccatcttttcgctgtggcgc
gatatctatcgcgggaacgacatcgactacatacgcatcaacacggtggacgatggggtg
gcggagcggtcggacaagcgccgtgcctacacgtacggcgtggtgcaggcgaagaacgat
gtggagatcgatatgcgtggccgctgcagtgccggacagaaggtgctggcctcgctcatc
atacggctggcgctggcggaaacgttcagcagcaactgtggcgtgatggcgctggacgaa
ccgaccactaacctggaccgggacaacatcgactcgctgtgtgaatcgttgcgtcgcatc
gtgtcggagcgggaagggggccactttctgctgatcgtcatcactcacgacgaggagttt
gtgaccaagctggaaaagtttgaaaactactatcgcatttcgcgcaacagcgaaggcaaa
tcggtgattaaagaggagcaactttaa
DBGET
integrated database retrieval system
