Anopheles arabiensis: 120896314
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Entry
120896314 CDS
T07381
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
aara
Anopheles arabiensis
Pathway
aara03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aara00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120896314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aara03400
]
120896314
DNA repair and recombination proteins [BR:
aara03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
120896314
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PilJ
Motif
Other DBs
NCBI-GeneID:
120896314
NCBI-ProteinID:
XP_040156258
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All DBs
Position
2:33120600..33124653
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AA seq
1183 aa
AA seq
DB search
MSKSKEKFPSSPNTLHNYFARSPASTKKPPGANPSTPTSALAAGPKAISSASSPQANSGT
PKSSKAAVKKEIESAGKEKRPAVVKPDADEGDDEPIGTQKKRRRILLLDDISDNEEEDAG
GRNNENKPNNNNNQEGYDEQTGTKRFALLSTFERPLETADTSERQAGKGEKPLGGTDEGP
VQKKIKLEALAEPHDEDPGAVLDEPTVWTHQKLDFLKPNKIKDIHGNRPGSEKYDNRTLF
VPDSYLNTLTPAMRQWWILKSKNFDCVLFFKVGKFYELYHMDAEVGVTELGFSFMKGEFA
HSGFPEAAYDRMSTTLVEKGYKVARVEQTETPDMMQERCKVERTTSKYDKVVRREICQIT
VMGTEVFGQQVTITANHQPRYMLAITESGRQGTAGCRYGVCFIDTSIGLFHLGEFEDDNQ
QSRLLTFLSHYPPVLVLHERATPSEGMQRIFKTLLANVKREALTAGTQLWTGEKTLKYLA
ETVYGGSSSEGSKWPATLRTMLDETDSLGLTPKESYQLALKALGGCVWYLQRCLLDQQVL
SLATFEEYVPLDEHREATETIAQRIDDAARAKRFMVLDSITLNNLKIVGSEGSLVDRMDH
CCSKFGKRLLYNWVCAPSCIKEEILQRQEAVTELIENVDLLQDVRQILGQLPDMERHLAQ
IHGFGLALRDHPARRAILYEEHVYGKKKMRDFIATLKGFQSLLPLPQMFASVHSQLLVRL
TQKANSNPAGAFPSMEKQIEFFESSFDHEKALKSGSIVPEKGLDTEYDAIEQEIKDLNAE
LEAYLAEQSKFFGCTVKYFGNDKKRFQLEVPEGRAKKATGDYTLEGTKTGKNATKRFHTE
ETRRFLKQMMLLEDRRKSVLKDLARRIFERFSRDYDMWKGCIELVATLDVLTSLAEYART
EGLSCVPVLLSKDETIGGKSFIEIEEGIHPCLSSEAAENFIPNGTAIGGDGKANLVLLTG
PNMGGKSTLMRQVGLLAVLAQIGSRLPAEACRMTLIDRIFTRLGASDDIMAGHSTFLVEL
NETSAILKHATADSLVLLDELGRGTATYDGTAVAGAVVHFLADLKCRTMFSTHYHNLVDS
FHEDPRIALGHMACMVENEEGDDPTQETVTFLYRYTDGACPKSYGFNAAKLAGMPTAIIK
RAYELSKTVEKEALKRKILMKLLKQAPQNEIKDLVVKLKSFQF
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagcaaggaaaagtttcccagctccccaaacacactgcacaactactttgcc
cgttcgccagccagtacgaagaaacccccgggcgccaacccatcaacccctacgagtgcg
cttgccgctgggccaaaagcaatctcctccgcctcctcccctcaagccaacagcggtaca
ccgaaaagctcgaaagcagccgtaaagaaggaaatcgaatcagctggcaaagaaaagcgt
cccgccgtcgtaaagccggacgccgacgagggagacgacgagccgatcggaacgcaaaag
aagcgtcgccgtatcctgctgctggatgatatatcggataatgaggaggaggatgcaggc
ggtcgcaacaacgagaacaaaccgaacaacaataacaatcaggaagggtacgatgagcag
acggggacgaagcggttcgcgctgctttcgacctttgagcggccattagaaacggctgac
acgagcgaaaggcaggcaggcaagggggagaaaccgctcggcggaacggacgagggaccg
gtgcagaaaaagatcaagctggaagcgctcgccgaaccgcacgacgaggaccccggagcc
gtgctggacgagccgaccgtttggacgcaccagaagctggactttttgaagcccaacaaa
atcaaggacattcacggcaaccggccgggcagtgagaagtacgacaacagaacactgttc
gtgcccgattcctatctcaacacgctcacaccggccatgcgacagtggtggatcttgaag
agcaaaaacttcgactgtgtgctgttcttcaaggtgggcaagttttacgagctgtaccac
atggacgccgaggtgggtgtgaccgagctcgggttcagcttcatgaagggagagttcgcg
cactccggctttcccgaggcggcgtacgaccgcatgtcgaccacgctggtggagaagggc
tacaaggtggcgcgggtcgagcagaccgaaacgccggacatgatgcaggagcggtgcaag
gtcgaacgcacgaccagcaagtacgacaaggtcgtgcgacgcgagatttgccagatcacc
gttatgggtacggaggtgttcgggcagcaggttaccatcacggccaaccatcagccgcgg
tacatgctggccatcacggaaagtggccgccaggggacggcgggctgtcggtacggcgtt
tgctttatcgacacctcgatcggactgttccatctcggcgagtttgaggacgataatcag
cagtcccggctgcttacgttcctgtcgcactatccgccggtgctggtactgcacgagcga
gctacgccgtccgaagggatgcagcgcatcttcaaaacattgctagcgaacgtcaagcgg
gaagccctcacggccgggacacagctttggacgggcgagaaaacgctcaagtatctggcg
gaaaccgtctacgggggttcgtcgagtgaagggtccaaatggccagcgacgctgcgcacc
atgctggacgagacggacagtttgggattgacgccgaaggaatcgtatcagctcgcgctg
aaagcactgggcgggtgcgtctggtatttgcagcgatgcctgctagatcagcaggtccta
tcccttgccaccttcgaggagtacgtaccgttggatgagcatagagaggcaacggagacg
atcgcacagcggatagatgatgctgcaagagccaaacggttcatggtgctggattcgatc
acgttaaacaacctgaagatcgtcggttcggaaggctcgctggtggaccggatggaccac
tgctgcagcaagtttggcaagcgactgctgtacaactgggtgtgtgcgccgagctgcata
aaggaggagatcctgcagcgacaggaagccgtgaccgagctgatcgagaacgtggacttg
ctgcaggatgtgcgtcagatactggggcaactgccggacatggaacggcatttggcgcag
attcatggctttgggctcgcgctccgcgaccatcccgcccgacgggccatcctgtacgaa
gagcacgtgtacgggaagaagaagatgcgcgatttcatcgccacgctcaaagggttccaa
tcgctgctcccactgccccaaatgtttgccagcgtacactcgcagctgctcgttcgcctc
acacagaaagctaactccaacccggccggtgccttcccgtcgatggagaagcagatcgaa
ttcttcgaaagctcgttcgaccacgagaaggcactcaagagcggcagcatcgtgccggag
aaagggctcgacacggagtacgatgcgatcgagcaggagatcaaagatttgaacgccgag
ctggaggcgtatctggcggagcagagcaaattctttggctgtaccgtcaagtacttcggc
aacgacaagaagcgcttccagctggaggtgccggagggcagggcgaagaaggccaccggc
gactacacgctcgagggcaccaagacgggcaagaacgcgacgaagcggttccacacggag
gagacgcgtcgcttcctgaagcagatgatgctgctcgaggaccgccgaaaatcggtgctg
aaggatctggcgcgacgaatctttgagcggttttcgcgcgactacgacatgtggaagggc
tgcatcgagctggtggccacgctcgacgtgctgacgtcgctggcggagtacgcccgcacc
gagggcctctcgtgcgtgccggtgctgctgagcaaggacgaaaccatcgggggcaaatcg
ttcatcgagatcgaggaaggcatccatccgtgcctgtcgagcgaggcggccgaaaatttc
atccccaacggtacggctatcgggggcgacgggaaggcgaacctggtgctgctcaccggc
ccgaacatgggcggcaagagtacgctcatgcggcaggtgggtttgctggccgtgctggcc
cagattggatcgcgcttgccggccgaagcctgccgcatgacgctgatcgatcgcatcttc
acgcggctcggtgcgagcgatgacattatggccggccacagcactttcctggtggagctg
aacgaaacgtccgccatcctgaagcatgccaccgccgacagtctggtgctgctggacgag
ctgggccggggcacggcaacgtacgacgggacggccgtggccggtgcggtcgtccacttt
ctggccgatctcaagtgtcgcaccatgttctcgacccactatcataacctggtggacagc
ttccacgaggatccacgaatcgcactggggcacatggcctgcatggtggaaaacgaagag
ggtgatgatcccacgcaagagacggtcacgttcctgtatcgctataccgatggggcatgc
ccgaaatcgtacggattcaatgcagccaagctggcgggaatgcccacagccatcatcaag
cgtgcgtacgagctctctaaaactgtcgaaaaggaagcgcttaagcgcaagatactgatg
aagctactcaagcaagcaccacaaaacgagatcaaggatctggtggtgaagcttaaatca
ttccagttttaa
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integrated database retrieval system
