Anopheles arabiensis: 120897958
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Entry
120897958 CDS
T07381
Name
(RefSeq) LOW QUALITY PROTEIN: small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
aara
Anopheles arabiensis
Brite
KEGG Orthology (KO) [BR:
aara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aara03009
]
120897958
Ribosome biogenesis [BR:
aara03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120897958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
PDEase_I
Motif
Other DBs
NCBI-GeneID:
120897958
NCBI-ProteinID:
XP_040159147
LinkDB
All DBs
Position
2:complement(71970280..71980722)
Genome browser
AA seq
2946 aa
AA seq
DB search
MKNRPLKHKASNAFSFKSFRERINEIDVRRGALYRVETDYELPETEDGTFFQQALVKWSL
QNLTDEYTGYQRGFKETATLPMLLFHKEAIVKHLSSCLSKATDDALEPLLELVVALAKDM
RKEFRPYFTGLFEVIVPFLHSDSADRVEWTLLCLAHLFKTLRSFLRSDFSLTFNRLLPLL
DETRSPPHAIDFATECLGYLARDLKDKGAFIRLMLKWQMQNEAYTFACGRLLFELLHGVQ
EQFHATAKQTLLQLYSILQQLEGTEADHLQDILTQTVTDIVERIQPEGIHVFWETMRSTI
DGCLATFEAQGETKKTVSKEASSAMVEHEEGKVVQYLTRLLQLNGIVLEHQYGRLLGDAL
SPTVSQLIRLLTCFTSPTIEYKETIVKHIIVLLRSKHLPLTQLEASRLTMNVLLLDHRPL
YDRFIDATVLCPMFEALIWPNFVKRLELELDDERLSFLAALLLKKTPLCGNGLELENWKP
FPINVVAGGNLEACMKKAITVSPVEVLDSSETYLSALIVLPHLSNFRPKTVANNAILEFV
RHTAESLQSGAMRELSDAADRMVELAAVAVETVVHLQEMEGKAYFDLLECLLPIVTKREC
LLLNSVHLLLVHIANQRKSGITYARFKRVQPVIHPLMASYDSSVRRLASAIMAFFAELPE
LVSSTGPLYGTLAQIECIEPQIQTYRQQVILFQNLAYESQLCNQAAEVARNEWTETVIRY
MLSVFAVNFKLLWEPAGTIVQSYADNGVKADEELFWRVFDTMLKMAEEQKAHEEIGSPES
SEAAVKHDETGTDGSGNDNDDSNGEAGSDSEQEEEEQVEENEQQKRANALFSKVVEFFPK
KSHIDFMNVRIQQLRMLHRCSTFCRSKGDRIAERFFAFLEHGKARDASIDAEEEAPDQSY
KRAREIKRKSSKSAGSGIHQVLLCYLKICTELTSKSVRKHADRLYETYETLVSSRNEEIQ
KVALNGIFTLGGSQLTPYKDFISRLTSEKTLKQALLSVFVPSDELEDEQEDGGFTSASGR
TKVAEEHRPMVVQLVLKVLDGKIKQNLGNGGPGGQHKATLLTFIGRLRIEELDLLLERWF
APYLAQLKTTPLETVRCITAALAEGVELVPTVPPVRVKTLLNFLAALQTEIAPMKKASYA
AKLMHLKICFDALLLPLDHSIYKKYKNQALVALVDLFDQYDASYQWTDDELDAVLYVHVW
PQLQLLPSDSIHTPTPLLKLLLMWSQSERLYVLLQRHPPVERQTETEGESEPATGDETTP
PSMTPLDAMICLLRGSQTKGNVCKQIFTALAAMLDGDERNSAEEQGRIREEDSDRVGNRS
RLLIPYVQDLLQYIRHQVRSKKTISSDLLLILTRLAESGMIGSDQKDEERIEKDRVSLLN
LLFPILARKVHEVGDERSGEDIRRLHIIIARLLNDIDDPLQYLKQLALSLQNVKNRGARK
ILLQIFDRLACRSPEMQLICTLVHGLNAMDRRWVDQPDNVARTTAFRSIDQMLSEDAPDG
QRMTGNVAIVFSLPSLHVLQSEKDFTVRQNACEYVCKVVLHLASANEWSAELHYCLDRIV
LHNIAAGFKHKGAGGERRNESIQLLGELSRTVGKPGVTTHPQCRVFAELWHFTGAGDGAE
RDFFENITHLQTYKHRKAMKRLAAKLAAMADEAKASGGNSRDTIGAAGPTSRTIVNYLLP
IVSHYICHDEYKKQTNLVEEAGNCIINLCRLLPWRGYHTVLQQYLRKLKHSWEYQKQLLR
IVIGIMDAFHFDLSAAATVDAEHPVEAKGGAAANALMNKKLLLQDESVEEAEETAPPAAP
EGEEKPKEDANEEQDAEDEGKESEEEEDAESVIEDEEEVEPTARCDPEEALRVARDIVHD
ISKTIIPSLLSSFNFATEAPVTTGGGGQMDRKARFAKQRTEMLKLPIAIAIVKLFMKLPR
KEIELNLPRLIIKVITFLKSRLKLARVQARNTLAHITLELGPSYLSFVLQNLLAMLTRGF
QRHVLTFTVHTVVERAQQHLASGPVLENILQTVVHICTEDIFGQLIGLLNGTTIETGSLK
KTNMPESKSSRKPYQTLYILAKHVQERMLADLFVPFRTVLSKYRTHQTVAKVQDAFHQIA
EGLVANETISPEALLVFVYGMVTGKVFTQCAVAGADGEQEDLQQRQQQQSEEEKKRAAKK
LLGNVPKPGSIYIIPDEPKRHGSAAATSALDLILAKTEGNDPTFLECGLELLQSFIRRKQ
VGTRSSDTEQVELLIQLIDPIVPTLVESLDSKHSKIICHSINCFSALLATEWPLKSFQQP
ETLDAIVAAIFTILHRYNTVALDVNNPNIGMVRASFRAIVAVLKYANASYSFTEEQLRLL
VMYIEQDLAVGGGRQTTAFVLLRSLLGRRYSFSELQQLMSKVFEMCVRSESDTERAECRQ
NIVDYVMNYPTSKKVKNYLLFFVDQLQYEVLSGRESACLLLKTLFQKLPKSTIDQTNSAL
FFALGVRLVNEDDTDIRTLVAECIETLLKRLDPSEKSSLVKIIQDMLGDRLLKHRELGTQ
LLLRILHSQPTERFIRSWLPNVLPALLQNLVPPTSAALSADGKFVKPLAPSVTLLTADPS
GDHLIIQTQNVFAELLRLQPAMLTAAQYNDTIDALAYTAQSLLSSGHQWVRFGALKLLYQ
IMNELDFDAIHERIRSLRSKRNDAEPEAEEELDSDDNPGGRQFLFQSPLRDCKTLTLDLC
AQLSPHSAMVSESDDEAAGLVTQLLFLIANILRAVPLEKKEKASSKRINLHWLVRRVRYV
VQGEIFKTPHIFTLRKHALHWMSSVVAILEQDTLEQLAPSLLIPAIRELTAQDISGSRSG
NDPSKVSLRKVAAKVGKDISVRLGAEQYDKMRNAIEESLRRKRTNRRMELAQEKINFPMA
AARRKEAKKTRTKEAKRRKTQSSLDDPFDLEGAGNGGVIPGMKRRAKSGTGSVPKKRRNM
EAMFRE
NT seq
8841 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcgaccgttgaagcataaggcttcgaacgcgtttagctttaaatcgttccga
gagcgcatcaacgaaatcgatgtgcgccgcggggcactgtaccgcgtggagactgactat
gagctgcctgaaaccgaggacggtaccttcttccagcaggcgctagtgaaatggtccctg
caaaatctcaccgacgagtacaccggctaccagcggggcttcaaggagacggccacgctg
ccgatgctgctgttccacaaagaggccatcgtcaagcacctgtccagctgtctgtcgaaa
gccaccgacgatgcgctggaaccgctgctcgagctggtggttgcactggcgaaggatatg
cggaaagagtttcgaccgtactttaccgggctgttcgaggtgattgtaccgtttctgcac
tccgacagcgcggatcgggtcgagtggacgttgctgtgcctggcgcacttgttcaaaacg
ctgcgcagcttcctgcgaagcgacttctcgctcacctttaaccggctgctgcctttgctg
gacgaaacgagaagcccaccgcacgcgatagactttgcaacggaatgtctcgggtatttg
gcgcgcgacctgaaagacaagggagcgttcatacggctgatgctgaaatggcaaatgcag
aacgaggcgtacacgttcgcctgcgggcggctgctgttcgagctgctgcacggtgtgcag
gagcaattccacgcgacggcaaagcaaacgctgctccagctgtacagtattctgcagcag
ctggaagggacggaggcggatcacctacaggacatactgacccaaacggtgaccgatata
gtggaacgcatccagccggagggcattcacgtgttctgggaaacgatgcgcagcaccatc
gatggatgtttggcgacgttcgaagctcaaggggaaacgaagaagactgtctcgaaggaa
gcgagctcagcgatggtagagcatgaggaaggaaaggtcgtacaatatttgacccgactg
ctgcagctgaacggaattgtgctggagcatcagtatgggcgactgttgggtgacgcactg
tcgcccaccgtgtcccagctgatccggctactaacctgcttcacctcaccgaccatcgag
tacaaggaaacgatcgtgaagcacattatagtgttgctgcgctccaagcatctgccgctg
acgcagctggaggcgagtcgattaacgatgaacgtgctcctgctcgatcaccgtccactg
tacgaccgtttcatcgacgccacggtactctgcccaatgtttgaagctctcatatggccc
aactttgtgaagcgacttgagctggagctggacgatgaacggttgagctttttggccgcg
ctgctgctaaagaaaacgccactctgtggcaatgggttggagctggaaaactggaaacca
ttcccgataaacgtcgtggccgggggaaacctggaggcttgcatgaaaaaggcaataaca
gtcagcccagtggaggtgctggatagtagcgaaacttatttgagcgctttaatcgtttta
ccccatctgagcaactttcggcccaaaaccgtagccaacaatgccatcctggagtttgtc
cggcacaccgcagaatcgctccagtcgggtgcgatgcgggaactgtccgatgcggcggat
agaatggtggaactagcggcggttgcggtggaaacggtcgtccacctgcaggagatggaa
ggcaaggcgtacttcgatctgctggagtgcctgctgccgatagtaaccaagcgcgagtgt
ctgctgctcaacagcgtccatctgctgctcgttcacattgcgaaccagcgcaaaagtggc
atcacctacgcgcgcttcaagcgagtccagcccgtcatacacccgctcatggcatcctac
gacagcagcgtgcgacggttggcaagtgctataatggcctttttcgccgagcttccggag
ctggtcagcagcaccggcccattgtacggtacgctggcccagatcgaatgtatcgagccg
cagattcaaacctaccgccagcaagtgattctgttccagaatctagcgtacgaaagtcag
ctctgcaaccaggcggccgaagtggcgcgcaacgaatggacggaaacggtgattcggtac
atgctgtccgtgtttgccgtcaatttcaagctgctgtgggaaccggccggcacgatcgtg
cagtcgtacgcggacaatggcgtcaaagcggacgaggaactgttttggagagtgttcgat
acgatgctaaagatggcggaagagcagaaggcccacgaagagattggaagtccagaatcc
tcggaggcggcagtaaaacacgatgaaacgggtactgatggatcgggcaatgataatgac
gattcgaacggtgaagctggcagcgacagtgagcaggaggaggaagagcaagtggaagag
aacgagcagcagaagcgggcgaatgcactgttttcgaaggtggtggaattcttccccaaa
aaatcacacattgacttcatgaacgtgcgcatacaacagctccgcatgctgcaccgctgt
tccacgttttgccgctcaaagggggaccgcatcgcggagcggttctttgcctttctcgag
catggcaaagcacgcgacgccagcatcgacgcggaggaggaagcaccggaccagtcctac
aaacgggcgcgcgaaatcaagcgtaaaagcagcaaatccgccggctctggcatacatcag
gtgctgctgtgctatctgaaaatatgcaccgagcttacgtcgaagtcggtgcgcaagcat
gccgatcggctgtacgagacgtacgaaacgcttgtcagcagccgcaacgaggaaatccag
aaggtggcgctgaacggcatatttacgctcggcgggtcgcagctcacgccgtacaaagac
tttatcagccggctgacgagcgagaagacgctgaagcaagcgctgctgtccgtgttcgta
ccgtcggacgagctggaggacgagcaggaggacggtggctttaccagtgccagcggacgc
acgaaggtggcggaggagcaccggccaatggtggtgcagctggtgctgaaggtgttggat
ggcaagatcaaacagaaccttggcaatggtggaccgggagggcagcataaagcgaccctg
ctcacgtttatcgggcgcctgcgcatcgaagagctagatctgctgctcgaacgttggttc
gcgccctatctggcacagttgaagaccactccgctggaaacggtacgctgcattacggcc
gcccttgcggagggcgttgagctggttcctacagtgccgcctgtcagggtgaaaacgctg
ctcaacttcctggctgccctgcaaacggaaattgcacccatgaagaaggcttcgtacgcc
gcaaagcttatgcatttgaaaatatgtttcgatgcactgctgctgccgctcgatcacagc
atttacaaaaagtataaaaatcaagcactggtagcactggtggacctgttcgaccagtac
gatgcgagctaccagtggacggacgacgagctggacgctgtcctgtacgttcacgtgtgg
ccacagctgcagctactgccgagcgatagtattcacacgccgacgccgctgctcaagctg
ctgctaatgtggagccaaagtgaacgcctgtacgtcctgctgcagcgccaccctcccgtc
gaacggcagacggagacggagggggaaagtgaaccggcgacgggcgacgaaacaacacca
ccgtccatgacaccactcgatgcaatgatctgtctgttgcgtggttcgcagacgaaaggc
aacgtgtgcaagcaaatctttaccgcactcgccgccatgctggacggcgacgagcgaaac
agtgcggaggagcagggccgcatccgggaggaagattccgaccgcgtcggcaatcgtagc
cggttgctgataccgtacgtgcaggatttgctgcagtacatacggcaccaggtcaggagc
aagaagacgatctcgagcgatctgctgctcattctaacacggctggccgagtcgggcatg
atcggtagcgaccagaaggacgaggagcgcatcgagaaggatcgtgtgtcgctgctgaac
ctgctgttccccatactggccagaaaggtgcacgaggtaggggacgagcggtcgggcgag
gatatcagacgcttgcacattatcatcgcacgcctgttaaacgatatcgacgacccgctg
cagtatctgaaacagttggcgctatcgcttcagaatgtgaaaaatcgcggagcgagaaag
atattgctgcaaatattcgaccggcttgcttgccgttcgcccgagatgcagctgatctgc
acgctcgtccatgggctgaacgcaatggatcggcggtgggtggaccagccagacaacgtg
gcccgtacgacggccttccgatcgatcgaccaaatgctgtcggaagacgcgccggacggt
cagcgaatgacgggcaacgttgcgatcgtgttttctctcccaagccttcacgtgttgcag
tccgagaaagactttaccgtgcggcagaacgcgtgcgagtacgtgtgcaaggtggtgctg
cacctggcgtccgcgaacgagtggtccgccgagctgcattactgcctcgaccgcatcgtc
ctgcacaacatcgccgccggcttcaagcacaagggagcgggcggtgagcggcgcaacgag
tcgattcagctgctcggcgaactgagccgcaccgtgggcaaaccgggcgtaacgacacac
ccgcagtgtcgcgtgtttgccgagctgtggcattttacgggcgcgggcgacggtgccgag
cgggactttttcgaaaacattacgcacctgcaaacgtacaagcatcgcaaggcgatgaag
cggcttgccgccaagctggccgctatggccgacgaggcaaaggccagcggcggcaacagc
cgggacacaatcggagcggccggaccgacgtcacgcaccatcgtaaactatttgctgccg
atcgtgtcgcactacatctgccacgatgagtacaaaaagcagacgaatctggtggaggag
gcgggcaactgcatcatcaacctgtgccggctgctgccctggcgcggctaccacacggta
ctgcagcagtacttgcgaaagctgaaacactcgtgggagtaccagaagcagctgctgcgc
atcgtgatcggcataatggatgcgtttcatttcgatctgtccgcggcggcgactgtggat
gcggagcatccggtcgaagctaaaggtggtgctgccgctaacgcattgatgaacaaaaag
ctgctgctacaggatgaatcggtggaggaagcagaggaaacggccccacccgctgcaccg
gaaggcgaggaaaagccgaaggaagatgcaaacgaagagcaagatgccgaagatgagggc
aaggaatcggaggaggaggaggacgctgaaagcgtgatcgaggacgaggaggaagtggaa
ccgacggcccgatgtgacccggaggaggcattgcgggtggcgcgcgatatcgtgcacgac
atatcgaaaacgatcataccgagtctgctgtcctcgttcaactttgccaccgaagcgccc
gtaacgacgggcggtggcgggcagatggaccggaaggcgcggttcgcaaagcagcgcacg
gaaatgctgaagctcccgatagcgatcgcgatagtgaagctgttcatgaagctgccgcgc
aaagagatcgagctcaatctgccccggctgattatcaaggtgattacgttcctcaagtcg
cggctaaagctggcccgcgttcaggcccgcaacacgctcgcccacattacgctcgagctg
ggcccgtcctatctgtcgttcgtgctgcagaacttgctggctatgttgacgcgcgggttc
cagcgccacgtgctgaccttcaccgtccacacggtggtcgagcgggcgcagcagcatctc
gcatccgggccggtgctggaaaacatactccaaacggtggtgcacatctgcaccgaggac
attttcggccagctgatcgggctgctgaacgggaccaccattgagacgggttcgctgaag
aagaccaacatgccggaatcgaaatcgagccgcaagccctaccaaacgctctacatcttg
gcgaagcacgtgcaggagcgcatgctggccgacctgttcgtgccgttccgcaccgtgctg
agcaagtaccggacgcaccagacggtggccaaggtgcaggacgcctttcaccagatagcg
gagggcctggtagcgaacgaaacgatcagcccggaagcgctgctcgtgttcgtgtacggt
atggtgacggggaaggtcttcacccaatgcgccgttgccggtgcggacggagagcaggag
gacctgcagcagcggcagcagcagcagtcggaagaggagaaaaagcgcgcggcaaagaaa
ctgctcggcaatgtgccgaaaccgggcagcatctacatcattccggacgaaccgaagcgg
cacggatcggcggccgccaccagcgcgctggatctgatcctggcaaagacggaaggcaac
gatcccaccttcctggagtgtggtctggagctgctgcaaagcttcatccggcgcaagcag
gtgggaacgcgcagcagcgacacggagcaggtagagctgctgattcagctgatcgatccg
atcgtgccgacgttggtggaatcactcgattcgaagcattcgaaaatcatttgccattcg
atcaactgctttagcgcactgttggctacagagtggccactgaaaagtttccagcagccc
gaaacgctcgacgcgatcgtggcggcgatcttcaccatactgcaccgctacaacacggtc
gcgctcgacgtgaacaatcccaacatcggcatggtgcgggcgagcttccgggcgatcgtc
gccgtgctgaagtacgccaacgcgtcgtacagcttcacggaagagcagctgcgtctgctg
gtgatgtacatcgagcaggatttggcggtcggtggaggtcgccaaacgactgcgttcgtg
ctgttgcgttcgctgctcggccggcgctacagcttcagcgagctgcagcagctgatgagc
aaggtgtttgaaatgtgcgtgcggtcggaaagcgatacagagcgagcggaatgtcgacaa
aacatagtagattatgtcatgaactacccaacgagcaagaaggtaaagaactatctgctt
ttctttgtcgatcaactgcaatacgaagtgctgtcgggacgtgaatctgcttgcctgctg
ctgaaaacgctgttccagaagttgcccaagtcgacgatcgaccaaaccaacagtgcgctg
ttctttgcgctcggcgtccggctggtcaacgaggacgacaccgacatccgaacgctcgtg
gccgaatgcatcgaaacgctgctaaagaggctcgatccgagcgaaaaaagctcactggtg
aagatcatccaggacatgctcggcgatcgattgctcaagcaccgcgagctgggcacgcag
ttgctgctgcgcatactacacagccaacctacagagcgcttcatccgctcctggctgccg
aacgtgctgcccgcgctcttgcagaacctggtgccgccaacgagcgccgcactgagcgcg
gacggaaaattcgttaaaccgctcgcaccgagcgtaacgctgctgaccgctgatccgagc
ggtgaccatctgatcatacagacgcagaacgtgtttgcggagttgctccggctgcagccg
gctatgctgacggcggcccagtacaacgatacgattgacgcgctagcgtacaccgcccag
tcgctgctgagcagcgggcaccagtgggtacgattcggcgccctgaagctgctgtaccaa
attatgaacgagctagatttcgacgccatccacgagcgcatccgatctttgcgcagcaag
cgcaatgacgcggagccggaagcggaggaagagttggacagtgacgacaacccgggcggt
agacaattcttgttccagtcgccgctgcgtgactgcaaaacgctaacactggacctttgc
gcccagctttccccgcacagtgcgatggtgagcgagagcgacgacgaagcagccgggctc
gtcacgcagctgctgttcctgatcgcgaacattctgcgtgcagtgccgctggagaagaag
gaaaaggcgtcatcgaaaaggatcaatctacactggctggtgcgccgggtgcgatatgta
gtgcagggcgaaatcttcaagacgcctcacatatttacactgcgcaagcacgcactacac
tggatgtcatcggtggtcgcgatcttggagcaggacacgctggaacaattggccccctcc
ttgctaataccggccatccgggagctgaccgctcaggatatatccggctcacggtccggt
aatgatccatcgaaggtttcgctgcgcaaggtggccgctaaggtgggcaaggacatcagc
gtacgccttggcgcggaacagtacgataagatgcggaacgcgatcgaggaatcgctgcgc
cgaaagcgcacgaaccgtaggatggagctggcgcaggagaaaatcaacttcccgatggcg
gccgcacgccgtaaggaggcgaaaaagacgcgcaccaaggaggcgaaaaggcgaaagacg
caatcctccctcgacgatccgttcgatctggaaggagcgggcaatgggggcgtcattccg
ggaatgaaacgccgggccaaatcgggcactgggtcagttccaaagaaacggcgcaacatg
gaggcaatgtttcgggagtga
DBGET
integrated database retrieval system
