Anopheles arabiensis: 120898403
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Entry
120898403 CDS
T07381
Name
(RefSeq) LOW QUALITY PROTEIN: focadhesin
KO
K27498
focadhesin
Organism
aara
Anopheles arabiensis
Brite
KEGG Orthology (KO) [BR:
aara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aara03019
]
120898403
Messenger RNA biogenesis [BR:
aara03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120898403
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3730
Focadhesin
INTS7_N
MUG113
Motif
Other DBs
NCBI-GeneID:
120898403
NCBI-ProteinID:
XP_040160156
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Position
2:complement(77503903..77507891)
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AA seq
1204 aa
AA seq
DB search
MDSLQAINSKLTVHSAAAQIEKILKISQKSTHQTLSEPELELLKQLCKSNNLRICQLANE
VLLHLATEGAVELGQLLGMLMTTLPNTTPGQFIVIGGSIFQLLLLDLRRRCLATENKCNY
TCQFDLKPPQHPVILLIEKTSTGSTSTVLDLITGTLNHSDDIIRTNSIEFLRPVMLHLFV
NVAIYADCQPLWKHLVGRALHDRKAETVVFEILAWRRDTTAPQTCYTIGLLTDALEIIQS
ENEANIQHQLEYALYMAAVLKDYIEYNYDPSRCFALLHKVGAAAMRCDPPPNLDVLMAII
GDLLPVVTPLKLYALLQLIQVILPGCGNNTRLLIKEAMIQLLGQPSYTATHLTLCDRILT
QIEKDFCAGGWQERCGFAXCPVRTTYFHQDSAKWTILCNWWNSSDTAIEDYLRRQKTSST
RFTLALGQLHRSIFLSPFYEEDVWRTNFDRLVKLMCHSDLQVAQCMVPLLYGLAQHKDAR
RRLHVLQTIASMGAKENLIGILKALTKGLDRSLCLDLYLRLWKAEPRTYPLLYDLLKDTS
RQPNEDRWEHTIARAYTIREVCLINPQQHGEDLVNLFSEVLSSPNNNENEVAICLSLDAI
SSLCEHQVVNIVSTWKVLGFRFANERRPKVIKSLCRFFGSVPLIKVTTPEQESLVNHIIG
TLWHYVTDYEDRGVLEAALGTLKHFHPDTLTLRQIPEVYRQGIDLPEPNEEGLSAADSAG
SVPPECWIQLLLYTNHRAIEAVGELLAHYITREIEGYRGGIYQTPEGRPEPSNLKYLPRA
SILSTIVNYLITQSTKFTKIETTPELVLVQMLRIVAKPYPKPIPPLNWCFLHEYFVHCFE
MRDACLQIAIKQMPYSGTAKRLVENYLNELCETIMLEEDLLKIYAAIAEITEAVQTDIYK
RFVHLSLQYLAERAEDQQFADNTPFIQTMALIAGALQRERKYENEDNFDHLCTTLENFFM
RFDLESDVFQKYIETLVHLPEKHFTALLKPSTWTGGINVEKLEKTIHLQLAFRRYNPSAK
SLHFFGLADIVSAVAKHQDASLSVFFLREWFNFVEQLARDIEEQPSHGKDLIGFIVELIG
LLQCNLTATADRIEQSTMFMLDALITAVVSFSGYGGLYGAQAFANDGSLQLAQFPFALVT
VFQQNMWREIEIKIYEFLYHLYGITSLPDEYAECMRDALICCKRQPYFQQSKTWPKFVTL
RQRL
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggatagtttgcaggcaattaattctaaactaacggtgcattcagcggcagctcaaatc
gaaaagattttgaaaatatcccaaaaatcaacgcaccaaacgctgtcggagccagagctt
gagctactgaaacaactctgcaaatcgaacaacctacggatatgccagctggcaaacgaa
gtgctgctgcatcttgccaccgaaggggcggttgaactggggcaactgctgggaatgctg
atgaccacgctgccgaacacaactcccggacagttcatcgtcatcggtgggtctattttt
cagcttctgctgctcgatcttcgacggcggtgcctagccacagaaaacaaatgcaactat
acgtgccagttcgatttgaagccacctcagcatccggtgattctgctcatcgaaaaaacc
agcacgggctccacgtcaaccgtgcttgatttgatcactggcactttaaaccattcggac
gatattatacgcacgaacagcatcgaatttttacgccccgtaatgttgcatcttttcgta
aacgtggccatatacgcagactgtcagccactgtggaaacatctagtcggtcgggcttta
cacgatcgcaaagcggaaacggtcgtgtttgaaattctagcatggcgccgagatacaaca
gcacctcaaacctgctacacgatcgggctgttaacggatgctttagaaataattcaaagc
gagaatgaagcaaacatacaacatcaactggaatacgccttgtacatggcggctgttcta
aaagattacatagagtacaattacgatccaagccgttgctttgctttgctgcataaagtt
ggtgctgcggcaatgaggtgtgatccgcctccgaatttagatgtgctgatggcgatcatt
ggcgatcttctgccggttgtaacaccactgaaactgtacgcattgctacaacttattcaa
gtgatactgccgggctgtgggaataacacccgcctgcttataaaagaagccatgattcaa
ttgctgggacagccatcatacacagcaacacatttaacgctttgcgacaggattcttacg
cagatcgaaaaggacttttgtgctggcggatggcaagaacgctgcggattcgcctaatgt
cccgttcgaacgacctactttcatcaagactcagccaagtggacgattctctgtaactgg
tggaattcttccgacacggcaatcgaggattatcttcgaaggcaaaaaacatccagcaca
agatttaccttagctttgggccaacttcatcgctcaattttcttgtcacctttctacgaa
gaagacgtatggcgaacgaattttgaccgtttagttaaactgatgtgccacagcgatttg
caggtcgcccaatgcatggtaccgctgctgtacggactagcgcagcataaagatgcccgg
cgccgactgcatgtgctgcaaactatagcgtcgatgggagccaaggaaaatctgattgga
attctgaaagctctcactaaaggactcgatcgttcgctgtgcctcgatctatacctgcga
ctatggaaggctgaaccgcgaacctatccgttactgtacgatctgctgaaggataccagc
cgtcagccgaatgaagatcgctgggagcatacaattgctcgcgcgtacacaatccgcgaa
gtgtgccttataaacccacaacagcacggcgaagacttggtaaacttattctcggaagtg
cttagcagtcccaacaacaacgagaacgaggtggccatctgcctctcgctcgatgctatc
tcgagtctctgcgaacatcaggtcgtcaacattgtgtcaacttggaaggtgttagggttt
cgtttcgctaacgaacgccgcccgaaagtgatcaaaagcttgtgccggttcttcggcagt
gtgccgcttattaaagtgaccacaccggaacaggaaagcttagtaaatcatatcattggt
acgctctggcattacgtgaccgactacgaggatcggggagttctggaggccgctctgggg
acgttgaaacactttcacccggatacgctgactcttcgccagataccggaagtttatcga
cagggcatcgatctgccagaaccgaatgaagaaggcctttctgctgccgacagtgccgga
tcggtaccgccagaatgttggattcagctgcttctgtacaccaaccatcgtgcaattgaa
gccgttggcgagcttttggcccactacattacccgcgagatcgaaggctaccggggcggt
atctaccagacgccagagggacgtccagaaccatccaacttgaagtatcttccacgggca
agcattttatcgacgattgttaactacctcataacgcaaagcaccaagtttacgaaaatc
gagaccacacccgagctggtgctggtacagatgctgcggatagttgcaaaaccatatccc
aagccgattccaccactgaattggtgttttctgcatgaatatttcgtccattgcttcgaa
atgcgcgatgcctgcctgcagatagccatcaagcaaatgccctactctggcactgccaaa
cggctggtggaaaactatctgaacgagctgtgcgaaacgatcatgctggaagaggacctg
ctaaagatttacgctgccatagcagaaatcaccgaagcggtgcaaacggacatttacaaa
cgatttgtgcacctttcgctacagtatctggctgagcgggcggaggatcaacagtttgct
gacaatactccattcattcagacgatggcattaatcgcaggcgccctgcagagggagaga
aagtacgaaaatgaggacaactttgatcatctctgcacgacgctggagaactttttcatg
cgcttcgatctggaatcggatgtttttcaaaagtacatcgaaacgttggtgcatcttcct
gagaaacacttcacggcccttctgaaacccagcacctggacgggaggcatcaatgtggaa
aaattggaaaaaacgattcatctacagcttgccttccggcggtacaatccttccgccaaa
tcgttgcacttcttcggtctcgccgatatagtgtcggcagttgcaaagcaccaagacgct
tcgttgagtgtcttcttcctgcgggagtggtttaacttcgtagagcaattagcacgggac
attgaagaacagccttcgcatggaaaggatctaatcggttttatcgttgagctgattggt
ctgttacagtgcaatctaacggctacggccgatcgtatagagcagagtaccatgtttatg
ctcgatgctctgatcacggctgtcgttagcttttccggttatggcggactgtatggagcg
caagcatttgcgaatgatggatcgttacagttggcacagtttccatttgcactggttacg
gtattccagcaaaatatgtggcgtgaaattgagataaagatctacgagttcctgtatcat
ctttatggtattacgtcgctaccggacgagtacgcagaatgtatgcgcgatgcgctgata
tgttgcaagaggcaaccatattttcaacagtcaaaaacgtggcccaaattcgtgactctg
agacaacgattatga
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