Anopheles arabiensis: 120899561
Help
Entry
120899561 CDS
T07381
Name
(RefSeq) nucleoporin Ndc1
KO
K14315
nucleoporin NDC1
Organism
aara
Anopheles arabiensis
Pathway
aara03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aara00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120899561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aara03019
]
120899561
Messenger RNA biogenesis [BR:
aara03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120899561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
120899561
NCBI-ProteinID:
XP_040161492
UniProt:
A0A182IGH5
LinkDB
All DBs
Position
2:54921196..54923650
Genome browser
AA seq
580 aa
AA seq
DB search
MDPVGSKDLAFRKICTERFVTSIYYCLLQQYLLVTIFLLFINFSILHPINWIVGTVRLLV
SFYPWIASVPLAIAVVVHGIVLAKSCLLETRYHSTYCHQLYRNLIQRSILLLTNGTIGCL
TAWLYTRFLRDEYRLLFLPSVQDDTVFLNDRFVYLVMSGVFGGCYFFLREQQNPDAVDFP
IILLPKVAQYWNNLSSVLTKSMRKSVIGMFIYFGFYYTFSCLFRHKLASVLGGAQLQEES
TLYSFCSIVMDIRLLVYTWLFSALILSNINLMHVLFGIFLAEPQNFRIETSAFQANDEPL
LADALAYKQIPIVQQLAVEDLFAIAEAQCLNRRKQLFSLTVPGGHPNNWRKLYDVCMKLI
GDFTQELDQSIGGIELKPAPPMVLMGGVLRPTASMDKDRFLKKQYNQNFGIRSLSTPTLP
GTPYSDSNKQEAKSEGKRESKAMLFASMLKRIPGYDFLFTESKSAKSHYLLSVQSQLIVK
VVHCLVAIASRSLYEDSYGVLQNDLPCIVHALLELKKVVDKIGSINLDVKKVDRNYIALK
GAVKKSLYRFTTAFGPYIKHLVIEPEDIKALQGFVNFREV
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggacccggtcggttcgaaggacttggcatttcgtaagatatgcacagaacgcttcgta
acatcgatatactactgcttgttgcagcagtatttgctggtgacgatctttctgctgttc
atcaactttagtatcctgcatccgataaactggatcgtcggaaccgtgcgactgctggta
tcgttttacccatggatcgcatcggttcctttggcgattgcggtcgtcgttcatggaata
gtgcttgccaagtcgtgtctactagagactcggtatcattcaacgtactgccaccaattg
taccggaatctcatacaacgttcgatactcttgcttaccaatggaacaatcggttgcttg
acggcatggctatacacacgatttctgcgagacgagtaccggcttctgttcctgcccagc
gtacaagacgatactgtgttcctcaatgaccgtttcgtatatctggtaatgagtggcgtg
tttggtggctgttacttcttcctgcgggaacagcaaaacccggatgccgtagactttccg
atcattctgctaccaaaagttgctcaatactggaacaaccttagcagtgtgttaaccaaa
tcgatgcgaaaatcagtgattggcatgtttatctactttggcttctactacaccttttct
tgtcttttccggcataagctagcttctgttttgggaggcgcgcaactgcaggaagaatcg
acgctgtacagcttctgcagtatcgtgatggatattcgcttgttggtgtatacttggttg
ttttcggcgctcatattaagcaacataaatttgatgcacgtgttgttcggtatttttctt
gccgagcctcaaaacttccgcattgaaacaagcgcatttcaggcgaatgatgagccattg
cttgcggacgcactagcatataagcaaattccgatagtacagcaactggcggtcgaggat
ttgtttgccatcgccgaggcacagtgtttgaatcgccgaaaacagctgttctcattaaca
gtacctggtggtcacccaaacaactggcgaaaattgtacgatgtgtgcatgaaattgatc
ggcgattttacccaggagctagaccaatcaatcggcggtattgaactgaagcctgcacca
ccaatggtcctaatgggaggcgttttgcgaccaacggcatcgatggataaggatcggttt
ctaaagaaacaatacaatcaaaactttggcatccggagcttatcaacgccaacgttacct
ggcacgccgtacagcgatagtaataagcaggaagcgaaatctgaaggaaagcgtgagagt
aaggccatgctttttgcatcgatgttaaagcgtataccaggctacgatttcttgtttacg
gagtcaaaatcagccaaaagccattatctgctctctgttcaatcgcagctgatagtgaaa
gttgttcattgtttggtagccattgcaagccgttctctctacgaggactcgtacggtgtc
ttacaaaacgacttgccatgcatcgttcatgctttactggagctgaaaaaggttgtcgat
aagatcggttccattaatctggatgtgaagaaagtcgatcggaactatattgctttaaaa
ggggccgttaagaagagcttatatcggtttaccacggcattcggaccgtatatcaagcat
cttgtaatagaaccagaggacataaaagccctgcaggggtttgtaaacttccgtgaagtt
tga
DBGET
integrated database retrieval system