Anopheles arabiensis: 120900326
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Entry
120900326 CDS
T07381
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
aara
Anopheles arabiensis
Brite
KEGG Orthology (KO) [BR:
aara00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aara04147
]
120900326
00535 Proteoglycans [BR:
aara00535
]
120900326
00536 Glycosaminoglycan binding proteins [BR:
aara00536
]
120900326
Exosome [BR:
aara04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120900326
Proteoglycans [BR:
aara00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
120900326
Glycosaminoglycan binding proteins [BR:
aara00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120900326
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Motif
Other DBs
NCBI-GeneID:
120900326
NCBI-ProteinID:
XP_040163105
LinkDB
All DBs
Position
2:complement(92168238..92409172)
Genome browser
AA seq
1198 aa
AA seq
DB search
MEDVAVDAVAAGPPRCCSTKHFCVRYHGTAPACVRSKLGWLYGTVVTLICIAHRVTSSEL
NIFGGQGIRDALAERDLMGAIEIPLQNGVKFVDGLDGFPAFGVTSEADLKSPYKMILSDH
LQDFALIATVRPQSSSGGWVFSVVNSLDTVVQLGLLLEPTAGGDQWNATLYYTDAKKERI
SQPLASFQVPYGKSWMKMIFKVLPDQVVFYYNCLEAGVVPVKKEPRKLVFDSASTVYIGQ
AGPVLKQKFEGTFLFLKIYGYPEIVKTHCNRTSLPIDEELESTDEFGDDFNSEMVYDQSG
DDDGFNEPPMISPPPPEYGYRLKGDKGERGTKGESIRGPPGPPGPQGPPGPPGPPGVAGP
KGGGAFDGDGSGDELKRLSQLYDTLPNRKHGGQCFCNASLIIEELKMDSKLREYLRGPQG
MPGKEGKTGSPGLTGVTGPQGERGASGPKGDKGDRGDQGAAGPEGLHGSKGEPGLDGAPG
VQGPPGPPGPPGLPENYDTNWNPSRMFKESMLGAPIQGMRGGSPGLKGEPGEKGEIGFPG
EKGEHGTKGDRGDPGLTGAKGERGHQGAHGQTGPKGPPGIPGIPGLPGQTGASGPKGEKG
NTGESGPPGPPGPPGMVMHTEGGRNGTTDQCQCQPGPPGPPGARGPSGYDGAPGLPGETG
LPGHPGLPGDKGERGLPGPKGEKGPEFIINENAAFNSSRANKGEKGERGQRGRRGKTGPP
GPIGPPGKPGGMGETWPGRPGPKGDQGPKGEKGDSMAMRGLKGDKGERGMNGRDGLPGPP
GLPAASGDGGVQYIPMPGPPGPPGPPGQPGPPGLSIVGEKGEPGMDSRSPFYSDSQHGFY
GRPGGRSSLDELKALRELKHHKDYEDSTLGPPGPPGPPGPAGRPLHDSDEIPNSYGANVR
IVPGAVTFQNAETMSKMSSTTPVGTLAYIIDEEALLVRVNKGWQYIALGTLVPIATVPPP
TTTIVPPQRADLQASNLIHNLPQPGDGSVFTATPEYESLRMAALNEPYSGDMQGIRGADF
ACYRQARRAGLLGTFRAFLSSRIQNLDSIVRIADRELPVVNTRGDVLFNSWNGIFNGQGG
FFSQAPRIYSFSGKNVLTDMAWPQKLVWHGSSAHGERAIDTYCDAWHSQTPDKVGLASSL
LGNKLLDQERYSCDNRFVVLCVEAVPQDRRRKRRDTTSQHEFANEKEYSQYLQSISAL
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgtcgctgtggacgcggtggcggcaggaccaccgcggtgctgttccacgaag
catttctgcgttcgttaccatggcacggcaccggcgtgtgtgcggtcgaagctggggtgg
ctttacggaacggtcgtgacgttgatttgcatcgcacacagggtgacctcatcggagctg
aacatatttggcggccaaggcatcagagatgcactcgccgaacgcgatctgatgggagcg
atcgagataccgttgcagaatggcgtcaagttcgtcgatggactggacgggtttccggcg
ttcggcgtcaccagcgaggcggacctgaagtcaccgtacaagatgatcctgtcggaccac
ctgcaggactttgccctcatcgcgaccgtcagaccgcagtccagctccggtggctgggtg
ttttccgtcgtcaactcgctcgacaccgtggtgcagctgggcctgctgctcgaaccgact
gccggcggtgaccagtggaacgcgacgctgtactacacggacgcgaagaaggaacgcatc
agccaaccgctggcctcgttccaggtgccgtacggcaagagctggatgaagatgatcttt
aaggtgctgccggatcaggtggtgttctactacaactgcctcgaggcgggcgtcgtgccg
gtgaagaaggaaccacgtaagttagtgtttgacagcgcgtcaacggtgtacattggccag
gccgggccagttctgaagcagaagttcgagggaacgtttctgttcctgaagatctacggc
tacccggaaatcgtgaaaacgcactgtaaccgaacgtcgctaccaatcgacgaagagctc
gagtcaacagatgagttcggtgacgactttaattcggaaatggtgtatgatcaaagtggt
gacgacgatggattcaatgaaccaccgatgatatcgccaccaccgcccgagtacggctac
cggttgaagggtgacaagggagaacggggcaccaagggggagagcatacgggggccaccg
ggcccaccggggccgcagggaccgccgggtccaccgggaccgccgggtgtagcgggcccg
aagggaggcggcgcattcgatggtgatggttctggcgatgagctgaaacgattatcacag
ctctacgacacactgccaaacagaaagcacggagggcaatgcttttgtaacgcatccctc
atcatcgaggagctgaaaatggacagcaaactgcgcgagtatcttcgcggcccgcagggc
atgcccggcaaggagggcaagacgggttctcccggtctgacgggcgtcactggtccgcaa
ggcgaacgtggtgcttccggcccgaagggcgacaagggagaccgcggtgaccagggcgcg
gccggaccggagggcctccacggaagcaagggggaaccggggctggatggggcacccggt
gtacagggcccacccggcccaccgggacctccggggcttcccgagaactatgatactaat
tggaatccgtcgcggatgttcaaggaatccatgctgggcgcaccgatccagggaatgcgc
ggtggatctcccgggctgaagggtgaaccgggcgagaagggcgagatcggattcccgggc
gaaaagggcgaacacggtaccaaaggtgaccggggtgatccgggtctgacaggtgccaaa
ggtgaaaggggtcatcaaggggcgcacggacaaacggggccgaaaggaccgcccggcata
ccgggcataccgggactccccgggcagacgggcgcctccggaccgaagggtgagaagggt
aacacgggcgaatcgggcccacccggtccaccgggaccgcccggcatggtcatgcacacc
gagggtggccgaaacggaacgaccgatcagtgtcagtgtcagccggggccacccgggcca
ccgggcgcacgcggtccatccggatacgatggtgcgcccggacttccgggcgaaaccgga
cttccgggccatccgggtctgccgggcgacaagggcgaacggggactgcccgggccgaag
ggcgagaaggggccggagtttatcatcaacgagaacgcagcattcaactcgtcgcgggct
aacaaaggagagaaaggcgagcgtggacagcgtggacgccgggggaagacgggtccaccg
ggaccgattgggccccccggcaagcctggcggtatgggtgaaacgtggccgggacgaccg
ggaccaaagggagaccagggaccgaaaggtgaaaaaggcgacagtatggcgatgcggggc
ctcaaaggcgataaaggcgaacgtggcatgaatggacgcgatggactgccgggcccaccg
ggtctgcccgctgcctccggtgacggtggcgtacagtacatccccatgcccggcccgccg
ggaccaccgggaccgcccggacagcccggcccgcccgggctgtccatcgtcggcgagaag
ggtgagcccgggatggattcgcgcagtcccttctacagtgattcgcagcatggattttac
ggtcgtccaggaggtcggtccagtttggacgagctgaaggcactgcgagagctcaaacac
cacaaggactacgaagacagcacgctcggaccgccgggaccgccaggaccgccgggaccg
gccggacgaccgctgcacgacagtgacgagataccgaacagctacggggccaacgtacgc
atcgtgcccggcgcagttactttccagaatgcagaaacgatgtcaaagatgtcttccacg
actcccgtcggtacgctcgcttacataattgacgaggaagcacttctggtacgagtgaac
aagggctggcagtacattgcacttggaacgctcgtgccgattgcaacggtaccgccgccc
accaccaccatcgttccgccgcagcgtgccgacctgcaggcgtcgaacctgatccacaat
ctcccgcagcccggcgacggctcggtgtttaccgccacgccggagtatgagtcgttacgg
atggcagcacttaacgaaccgtactcgggcgacatgcaaggcatccgtggggcggacttc
gcgtgctatcgacaagcgcgccgtgccggtctcctgggaacgtttagagcgttcctttcg
tcgagaattcaaaacctggactcgatcgtacggatagcggatcgcgagctgccggtcgtg
aacacccgcggtgacgtgctgttcaactcgtggaacggcattttcaacgggcagggcggg
ttcttctcgcaagcgccccggatatacagcttcagcgggaagaatgtgctcaccgatatg
gcgtggccccagaagctggtgtggcacggttccagtgcgcacggcgagcgtgcgatagac
acgtactgtgacgcgtggcattcgcagacgccggacaaggtcgggctggccagcagtttg
ctcggtaacaaactgctagaccaggaacggtactcctgtgataatcggttcgtggtgctg
tgcgtcgaggcggtcccgcaagaccgaagacggaagcgacgcgacactaccagccaacac
gagtttgccaacgagaaagagtacagccaatatttgcagagtatcagcgcactgtaa
DBGET
integrated database retrieval system
