Anopheles arabiensis: 120900426
Help
Entry
120900426 CDS
T07381
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
KO
K14323
protein CASC3
Organism
aara
Anopheles arabiensis
Pathway
aara03013
Nucleocytoplasmic transport
aara03015
mRNA surveillance pathway
aara03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aara00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120900426
09122 Translation
03013 Nucleocytoplasmic transport
120900426
03015 mRNA surveillance pathway
120900426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aara03019
]
120900426
Messenger RNA biogenesis [BR:
aara03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120900426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
120900426
NCBI-ProteinID:
XP_040163335
LinkDB
All DBs
Position
3:complement(77924570..77933581)
Genome browser
AA seq
1305 aa
AA seq
DB search
MSEKAAVVTAAAAAAVPAPLPPAPVVPAPAPAAAAAAAAPAAGAAAATTTTTTTPPAQQK
LSESDDFTDNSAENTKEANQEDTSQQSGLATVESEYDTASDSPSDGGEEEDEEDDYEEEE
SGGEEEEDEEDDDGTEEDDEDDGTEEEEEDEEDDDDVIEVHERQSGDGQEQDAESRRKVD
DDEDRSNPQYIPKKGTFYEHDDRTAEDDLDDSGVDGDEQRAKRNEDGLGEGDSHGGGGGG
GGGGGGGGGGELGAPGMYGGERRGSEKGGGGGTGGGAGAKGAKKWQASADRWTHDRFDES
EQAPKSQAELVFAYGYDIRSEDGPPKARRKRRYARGPNRYTRNWEDEDAYQKSSGAEHHQ
RHKKLPRPEEFPELAGGANGKSGRATGRGRREGPPKGGDGQRRQSGGTEGGVAAGGRAKS
SDVRRAGGTGPDRSMGRSERVRSGDWAASAASGDRDREQDQRAGDWEQRPEYGGGNGRYR
NEERGARNNYHNKENKLAGSGGRNSKEKEYKVMSSLQYKGQARNKNGEAGGAGTGGSGVA
PMGAGAGAGSGQPGGSPGLATAAAAPMMHSSSAGALSGSSNSNKMNNHGPVQQQQQQQQH
GNSTSPGGERIHHADPNHQSRMMNVVTTSASLGSVPSAGVQQQHYGIHGQMAQHPHQQQQ
QPSQPPQKMKQGYLEEDHSKYVPLYAGSAPMQQANAAGGQLPMSQRSQISPRAIVAQPAP
PTEQVSSERMQLEYQAMPQGYGGQQRPLTVQQQQQQVANQMQHQQQMLPAEVPRATKRYS
TQRQRSAMESAANVNAMQVQQQQQQQQVQQQQQQQAAAAAAAAAAAASMHEQRQLMQQHQ
EQMLRHQHEQQLNKQKQQQQVYAQQQLPQSGPAPGGLPMTLQPAEYHVAVGKTHQQPPPP
PQGAPGGQSAPVQYHQTAALYYAPAPGGAGGPAPGEYVTAAAPGGQPQQQQAPPPPQQQP
SQAPPPPQAQYAPPPYAAQGPPPQPPQSAPYLAGPVPAPSAYLPAPQPASVPQPGPQPPT
GVVPGGGAPPPPMNFVPALGPPPSGAAPGVSPAQYPTAYAASFQTGYAPAVGVVPQPVPG
GPPPSAVVAGPPTGGPGGPPPPTALYQPSGGITYYAPQTQAQAPRPLPTGRRPTAAIPIL
APPDRKPAGAATTPASASAANKSIGATNRSTGDESTAANAAEGGAEGAGGSAPADSGENI
DHILDNMFVQRPQYQPPSRKSPSPALATTAATAAATATPQQAPGGNETPNGAVDAAGTEG
QEPMDKIGESVKKMSIQDTDKLSIAGGVPAVEAKEVAAGVSEAVE
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagaaagcagcagtcgtcacagcagcagcagccgcggccgttccggcaccgcta
ccgccagctccggtagtgccagctccggctccggcagcagcagcagcagcagcggcacca
gcagcaggagcagcagcagcaacaacaacaacaacaaccacaccgccagctcaacagaag
ttatcggaatcggatgattttaccgacaattcggcagaaaacacaaaggaagccaatcag
gaggacacttcgcagcagagcggtctggcgacggtcgagtccgagtacgatactgcctcc
gattcgccgtcggacggcggcgaggaggaagatgaagaggacgattacgaggaggaggaa
agcggtggcgaggaagaggaggacgaagaggatgacgacggtacggaggaggacgacgag
gacgacggtaccgaggaggaggaggaagacgaggaggacgacgatgatgtgatcgaggtg
cacgagcggcagagcggcgatgggcaggagcaggacgcggaaagccgccgcaaggtggac
gacgacgaggaccgcagcaacccgcagtacatcccgaagaagggcacgttctacgagcac
gacgaccggacggccgaggacgatctggacgattcgggggtggacggggacgagcagcgg
gcgaagcggaacgaggacgggctcggtgaaggcgattcgcacggtggcggcggtggtggt
ggaggcggtggcggcggcggcggaggcggtgagctcggagcgccaggaatgtacgggggc
gagcggcgcggttcggagaagggcggcggtggcggtaccggtggcggagccggagcgaag
ggagccaagaagtggcaggcatcggccgaccggtggacgcacgaccggttcgacgagagc
gagcaggccccgaaatcgcaggctgagctggtgttcgcgtacgggtacgacatccggagc
gaggatgggccgccgaaggcgcgcaggaagcgccggtacgcccgtggcccgaaccggtac
acgcgcaactgggaggacgaggacgcgtaccagaagtcgtccggagcggagcaccaccag
cggcacaagaagctgccgcggccggaggagttccccgagctggcgggcggcgccaacggg
aaaagtggtcgggcgacgggccggggccgccgggaaggcccgccgaagggtggagacggg
cagcgaaggcagtccggcgggacggagggtggtgttgctgctggtggtcgtgcgaagtcg
tccgatgtgcggcgggcgggtggcaccgggccggaccgctcgatgggccgttcggagcgg
gtacggtcgggcgattgggctgcgagtgcggccagtggcgatcgtgaccgggagcaggat
cagcgtgccggcgattgggagcagcggcccgagtacggaggcggcaatgggcggtatcgc
aacgaggagcgcggcgcgcgcaacaattatcacaacaaggagaacaagctcgccggcagc
ggcgggcgaaatagtaaggagaaggagtacaaggtgatgagctcgctgcagtacaagggt
caggcgagaaacaaaaatggcgaagcaggaggagctggaacgggtggcagtggggttgca
ccgatgggagctggagctggggcaggatcgggacaaccgggtggtagtccgggactggct
actgccgccgccgctccgatgatgcacagcagcagtgccggtgcgctgtccggcagcagc
aatagcaacaagatgaacaaccatggcccagtgcaacagcagcagcaacagcagcagcat
ggaaacagcaccagccccggaggtgaacgcatccaccacgcggacccgaaccatcagagc
agaatgatgaacgtggtgacgacatcggcttcgctgggttcggtgccatcggccggggtg
cagcaacagcactacggcattcatggccaaatggcgcagcatcctcatcagcagcagcag
caaccgtcccaaccgcctcagaagatgaaacagggctacctagaggaggaccattcgaag
tatgtacctctgtacgcgggatcagcgccgatgcaacaggcaaacgcagccggtgggcag
cttccgatgagtcagcgatctcaaatctcaccccgcgcaatagtggcacagcccgcaccg
ccgaccgagcaggtgtcgtccgagcgcatgcagctggagtaccaagcgatgccgcaaggg
tacggtggccagcagcgaccgttgacagttcagcagcagcagcagcaggttgctaatcaa
atgcaacatcagcagcagatgctgccggcggaggttcctcgtgcgacgaaacgatactcg
acacagcggcagcgatccgcgatggaaagtgcggccaacgttaatgcgatgcaagtgcag
cagcagcagcagcaacagcaggtgcaacagcagcagcaacagcaagcggccgctgcggca
gcagcggcagcagcagccgcctccatgcacgagcagcgccagctgatgcaacagcaccag
gagcagatgctgcggcatcagcacgaacaacagctcaacaagcagaagcagcagcagcag
gtgtacgcccagcaacagctgccccagagcggaccggcacccggtgggctgcccatgacg
ctgcagcccgccgagtatcacgtggccgtcggcaaaacgcatcagcaaccgcctccgccg
ccccagggagctccgggtggtcaaagcgcaccggtccagtaccaccagacggcggccctc
tactacgcgcccgcgccgggtggtgctggtggaccggcaccgggcgagtacgtcaccgcg
gccgctcccggcggtcagccgcagcagcagcaggcgccaccaccgccgcaacagcaaccg
tcccaggcgccaccacccccgcaagcccagtatgcaccgcccccgtacgcagcgcaagga
ccgccgccgcaaccgccccagtccgccccgtacctggcgggtcccgtgcccgcccccagt
gcctacttgccagcgccacaacctgccagcgtgccgcagcccggcccgcagccgcccacg
ggcgtcgtgccgggcggtggtgcaccgcccccgccgatgaactttgtgccggcgctcggg
ccaccgccgagcggggccgcaccgggcgttagcccggcccagtacccgaccgcctacgcc
gccagcttccagaccgggtacgcgccggccgtcggtgtcgtgccgcagcccgtgcccggt
ggcccaccgccatcggccgtcgtcgccggtccgcccaccggaggccccggtggaccaccc
ccgccgaccgcgctgtaccaaccgtccggtggcatcacgtactacgcacctcaaacgcaa
gcgcaagcaccccgcccactgcccaccggtcgaaggccgaccgccgctataccgattctg
gccccgccggatcgtaaaccggccggagccgccaccacgcccgccagcgcgagtgcggcg
aacaaatcgatcggggcaaccaaccgctccaccggggacgaatcgacggcagcgaatgct
gccgagggcggggcggagggagccggcggctctgcgccggctgacagtggcgaaaacatc
gaccacatcctggacaacatgttcgtgcagcgcccccagtatcagccaccgtcgcgcaag
agtccgtcgcccgcgctggcaacaactgcagccaccgccgccgccaccgctacgcctcag
caagcgccgggcggtaacgaaacgcccaacggggccgtggacgcagcaggcaccgaggga
caggagccgatggataaaattggagagtctgttaagaaaatgtccatccaagacacggat
aaactgtccatcgccggtggtgtgccagcagtagaggccaaagaggttgcggccggtgtg
agcgaagcggttgaatga
DBGET
integrated database retrieval system
