Anopheles arabiensis: 120900538
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Entry
120900538 CDS
T07381
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
aara
Anopheles arabiensis
Pathway
aara04512
ECM-receptor interaction
aara04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aara00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120900538
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120900538
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aara00535
]
120900538
Proteoglycans [BR:
aara00535
]
Extracellular matrix (ECM) proteoglycans
Others
120900538
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
120900538
NCBI-ProteinID:
XP_040163591
UniProt:
A0A182ICM6
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Position
3:36226528..36229559
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AA seq
770 aa
AA seq
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MYSISLTRLLMLLLCLTSVVKSQIEDEEGDDYEEGPCGRWRPGDVDLRSFDLIREFRLDQ
IEASSKHMHRLQGTNEYQTAYRFEKEANLTMRSVDAFPLGLPHQFSFECTYRIEDEGESS
WHLFEVTNEVQESQLAITLNPGRQILQIGLPATEGEQQIVEYHHTTLFDHNWHKIMLGVT
NDYLNLWVDCRPVRDTDGNLNVPLEPRDRFDVADGYVSISRFAETSVFEPESPIIDLQWM
VMNCDPTRPARGNCDELPVYDVASLTANLPEGPTPKSDCNTVCPPGYNGTDGAPGPVGPP
GLPGQKGEAGAFGRRGPPGPRGLEGPPGLPGIGQKGEKGEIGVGIAGLKGQKGEPGVAAV
AGSTVAGPVGPRGLPGPQGPPGAGLRGEKGDAGAPGRDGQSITGPRGLIGPPGAPGLPGA
DGLPGASGVKGERGAPGPRGEDGVGYPGEPGPRGPKGEPGSARAGAGVAGPPGLPGLQGN
DGAKGEKGESGTRGLPGTQGLPGIPGAPGLPGPPGPPGDGSGGGGGGGGRYFENFMSYGH
RGPTGYTGLPGERGAGGLRGPEGAPGVPGPPGVDGAPGPQGIPGLPGQTGPPGVPGVPGR
SYTEAEVSDICRAVLRDHIAELTEGLIGPPGPPGVSRPGKPGTPGRPGEKGERGFPGFTG
DRGIPGEQGAPGVAGPPGERGEPGIPGENGRDGVGYVGPQGPVGPPGPPGDSVIGPPGRA
GERGEPGKAGHPGVRGAPGVPGVCPNDCYMAAAAVAQNFRTNQQTKGPNY
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaatttctttaacaagactgctcatgctgttactgtgtctaacaagcgttgta
aagtcgcaaatcgaagatgaagagggagacgattatgaggaaggtccgtgcggacgctgg
cgaccgggcgatgtggatctgcgatcgttcgacttgatccgcgagttccgcctggatcag
attgaggcgagcagcaagcatatgcaccggctgcagggtaccaacgagtatcagacggcc
tatcgcttcgagaaggaggcgaacctaacgatgcgctcggtcgatgcgtttccgctcggg
ctgccgcatcagttttccttcgagtgtacgtaccgcatcgaggatgagggcgaatcgtcc
tggcatctgttcgaggtgacgaacgaggtgcaggaaagccagctagccatcacactgaac
cccggccggcagattctgcagatcgggctacccgccaccgagggtgagcagcagattgtg
gagtatcatcacactacgcttttcgatcacaactggcacaaaattatgctcggtgttacc
aacgattatctgaacctttgggtcgattgtcgtccagtgcgcgataccgacggaaatctt
aacgttcccctggagccgcgggatcgtttcgacgtagccgatgggtacgtttcaatttcc
aggtttgcggaaacttccgtctttgagcccgaatctcccatcatcgatctgcaatggatg
gttatgaactgtgacccaacgcgaccggcccggggcaattgtgacgaactgcccgtgtac
gatgtcgcatctttaactgcgaatcttccggaaggaccaactccaaagtcggactgtaat
accgtctgtccaccaggatacaacggaacagatggagctccaggaccagttggaccaccc
ggtcttccaggacaaaaaggtgaagctggtgcatttggaagacggggacctcccggacct
cgtggattggaaggacctccgggacttcctggaattggtcagaagggcgagaaaggagag
atcggagttggtattgctggactgaagggacagaaaggtgaaccaggagtcgctgctgtg
gccgggtcgaccgtagccggtcccgttggaccgcgaggtcttcccggtccccaaggtcct
cccggtgcagggctaagaggagagaaaggtgatgccggtgccccgggtcgtgatggacaa
tcgataactggaccacgtggcttgattggaccgcccggagcgccaggtcttcccggtgcg
gacggtttacctggtgcatcaggtgtaaagggagagcgcggcgcaccaggaccaagaggt
gaagatggagttggatacccgggagaaccgggtccaagaggaccgaaaggagagcctggt
agtgctagggctggtgcaggtgtagcaggacctcccggtctgcctggactgcaaggaaat
gacggcgcaaagggagagaagggagaatccggtacccgtggcctcccaggcactcaagga
ctaccgggtattcccggtgctccaggcctaccaggtcctccgggtcctcccggtgatggt
tcaggagggggtggcggcggtggaggaagatactttgaaaacttcatgtcctacggccat
cgaggaccgacaggttacactggattgcccggagagaggggcgccggtggtctgcgaggt
ccagaaggtgctccaggcgtaccaggtccaccaggtgtggatggtgctccaggacctcag
ggaataccgggcctaccgggacaaaccggacctccgggtgttcctggtgtccccggccgt
agctacactgaggcagaagtaagcgatatctgtcgggcagtgctgcgagatcacattgcc
gaactgacggagggattgattggacctcctgggccaccgggagtttcccgtccgggcaaa
cccggtactccgggacgtccgggcgaaaagggcgagcgtggattccccggtttcaccggt
gataggggcatcccgggagaacagggagcgccaggcgttgccggaccaccgggagagcgt
ggagaaccgggcattccgggcgagaatgggcgtgacggtgttggctacgttggtccgcaa
ggcccggtcggcccccccggaccgccaggagactccgtgatagggccaccaggtcgggca
ggtgaacgtggagaacctggtaaagcaggtcatccaggcgttcgtggagcaccgggtgtt
cctggcgtttgccccaacgattgctacatggcggcagcggcagtggctcagaacttccgc
accaaccagcaaactaaaggacccaactattag
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