Anopheles arabiensis: 120900567
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Entry
120900567 CDS
T07381
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
aara
Anopheles arabiensis
Pathway
aara03013
Nucleocytoplasmic transport
aara03015
mRNA surveillance pathway
aara03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aara00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120900567
09122 Translation
03013 Nucleocytoplasmic transport
120900567
03015 mRNA surveillance pathway
120900567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aara03019
]
120900567
03041 Spliceosome [BR:
aara03041
]
120900567
Enzymes [BR:
aara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120900567
Messenger RNA biogenesis [BR:
aara03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120900567
Spliceosome [BR:
aara03041
]
Complex C
Other components
EJC/TREX
120900567
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
120900567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
120900567
NCBI-ProteinID:
XP_040163640
UniProt:
A0A182I4W6
LinkDB
All DBs
Position
3:24998838..25003940
Genome browser
AA seq
423 aa
AA seq
DB search
MADNEDLLDYEEEDQTEQVVAETTEQPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVPYVLVMCHTRE
LAFQISKEYERFCKYMPTIKVAVFFGGLPIQKDEEVLKTTTPHIIVGTPGRVLALIRNKK
LNLKNLKHFILDECDKMLEQLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQ
DPMEVYVDDETKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALA
QLLTEQNFPAIGIHRGMVQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITFISDEADAKILNDVQDRFDVNINELPDEIDLSSYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcagataacgaggatcttttagattatgaggaggaggaccagaccgagcaggtggtg
gcggagaccacggaacagccgaagaaggacgtgaagggtacttacgtatcgattcacagt
tccggtttccgtgattttctgctgaagcctgaaattctgcgcgccattgtcgactgtggt
ttcgagcatccctccgaagtacaacacgaatgtatcccgcaggcggtgcttggtatggac
attctgtgccaggcaaagtccggtatgggaaagacggccgtgtttgtgcttgccacgctg
cagcagctggagccgaccgagaacgtgccgtacgtgctggtcatgtgccacacgcgcgag
ctcgctttccagatcagcaaggagtacgagcggttctgcaagtacatgcccaccatcaag
gtggccgtgttcttcggcgggctgccgatccagaaggatgaggaagtgctgaaaacgacg
accccgcacatcatcgtcggaacaccgggccgcgtgctggcgctcatccgcaacaagaag
ctgaacctgaagaacttgaaacatttcatcctcgacgagtgcgacaaaatgctcgaacag
ttggatatgcggcgcgacgtccaggagattttccgtaacacaccccacggaaagcaagtg
atgatgttctccgccacgctgagcaaagaaattcgcccagtgtgcaaaaagttcatgcaa
gatcccatggaagtgtatgttgacgatgaaaccaaattaactctgcacggtttacagcag
cactacgttaagctgaaggaaaacgaaaagaacaagaagctcttcgaactgctcgatgtg
ttggaatttaaccaggttgtaatcttcgtgaaatccgtgcaacgttgcatggcgctggct
cagctgctgaccgagcagaacttccccgccatcggtatccaccggggcatggtgcaggag
gagcgcttgtcgcggtaccagcagttcaaggatttccagaagcgtatccttgtcgcgacg
aacctgttcggccgcggtatggatatcgagcgtgtgaacattgtgttcaactatgatatg
ccggaagactccgacacctacctgcatcgggtggcccgtgccggccgtttcggtaccaag
ggtctggccattaccttcatctcggacgaggcggacgcgaagattctgaacgatgtgcag
gaccgattcgatgtgaatatcaacgagctgccggacgaaatcgatctctcctcgtacatt
gaaggacgataa
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