Anopheles arabiensis: 120901295
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Entry
120901295 CDS
T07381
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
aara
Anopheles arabiensis
Pathway
aara03022
Basal transcription factors
aara03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aara00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120901295
09124 Replication and repair
03420 Nucleotide excision repair
120901295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aara03021
]
120901295
03400 DNA repair and recombination proteins [BR:
aara03400
]
120901295
Transcription machinery [BR:
aara03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120901295
DNA repair and recombination proteins [BR:
aara03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120901295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
120901295
NCBI-ProteinID:
XP_040165025
UniProt:
A0A182HVX2
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Position
3:complement(68685839..68687769)
Genome browser
AA seq
501 aa
AA seq
DB search
MSEAKSSQGNSGTTSKGSSSSGSSLITKPANLECKDLEEYLKSRPPEVLEKLYNYPAICL
AVYRELPEIARQFVIRILFVEQPIPQAVVSSWATQVYAKENTSVSQVLTELGVWRSAAYP
GGLAAWELCPTFKKNLKIALLGGGRPWSMSNALDPDQKSRDIDFLDTYAMSRWRCVLHYM
VGAGSSKGMEGEGISPDAVRILLHANLMKRDESDGSPVITRQGFQFLLLDTQAQVWHFML
QYLDTCEARGLNLPECLSMLFQLSFSTLGRDYSSEGLSPGLLTFLQHLREFGLVYQRKRK
EGRFYPTRLAHNITSKNATHATTLAQDQESNATKDKGYIIVETNYRVYAYTDSNLQVALL
GLFTELLYRFPNLVVGVLSRDSVRQAFRGGITAEQIISYLEQHAHPTMLTVEQAINSKSS
LPPTVVDQIKLWENERNRFTYTEGVVYNQFLSQADFITLRDYAQSIGVMIWQNERIRTMV
VTKNGHDDVKKFWKRYSKGGS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggctaagagcagccaaggtaacagcggcaccaccagcaaaggatcgtcctcg
tccggctcgtcgctcatcaccaaaccggctaatttagaatgcaaagatttggaagagtat
ctgaaatcgcgaccgcccgaggtgctggaaaagctgtacaactaccccgccatctgtctc
gccgtgtatcgcgagctgccagaaatagcgcgccagttcgttataagaattctgttcgtc
gagcaaccgattccacaagcggtcgtgtcctcgtgggcaacacaggtctacgcaaaagaa
aacacatccgtctcgcaggtgctgaccgagctgggcgtatggcggagcgcggcctatccg
ggcgggctggccgcctgggagctgtgcccaacgttcaagaagaacctcaagatcgcactg
ctgggcggcggccggccctggtcgatgtcgaacgcgctcgatccggaccagaagtcgcgc
gacatcgacttcctggacacgtacgccatgtcccggtggcgctgcgtgctgcactatatg
gttggtgccggtagctccaagggcatggagggggagggcatctcgccggacgcggtgcgc
atcctgctgcacgccaatctgatgaagcgggacgagtcggacggcagcccggtcatcacc
cggcagggcttccagtttctgctgctcgacacgcaggcccaggtgtggcactttatgctg
cagtatctcgatacgtgcgaggcgcgcggcctcaacctgcccgagtgtctgtcgatgctg
ttccagcttagcttcagcacgctcggccgggattacagctccgaggggctcagtccgggc
ctgcttaccttcctgcagcatttgcgcgagttcgggctggtgtaccagcggaagcgcaag
gagggccggttctatccgacgcgcctggcgcacaacatcacctcgaagaacgctacccac
gccacgacgctcgcccaggaccaggaatcgaacgcgaccaaggacaagggctacatcatc
gtcgagacgaactatcgcgtgtacgcgtacaccgactcgaacctgcaggtggccctgctc
ggcctgttcaccgagctgctgtaccggtttcccaacctggtggtcggtgtgctgtcgcgc
gattccgtccggcaagcgttccggggcggcattacggcggagcagatcatcagctacctg
gagcagcatgcccacccgacgatgctgacggtggagcaggcgatcaacagcaaatcctcc
ctgccgcccacggtcgtcgatcagataaagctgtgggagaacgaacggaaccggttcacc
tacaccgagggcgtcgtgtacaatcagttcctgtcgcaggccgactttatcacgctgcgc
gattacgcccaatcgatcggcgtgatgatctggcagaacgagcgcatccgcacgatggtg
gtcacgaagaacgggcacgacgatgtgaaaaagttctggaaacggtactccaagggtggc
agttag
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integrated database retrieval system
