Anopheles arabiensis: 120902342
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Entry
120902342 CDS
T07381
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
aara
Anopheles arabiensis
Pathway
aara03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aara00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120902342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aara03041
]
120902342
Spliceosome [BR:
aara03041
]
Complex A
U1 snRNP components
U1 related factors
120902342
Complex B
120902342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
GIDA_C_1st
Motif
Other DBs
NCBI-GeneID:
120902342
NCBI-ProteinID:
XP_040166960
UniProt:
A0A182ICH9
LinkDB
All DBs
Position
3:complement(8054602..8057875)
Genome browser
AA seq
911 aa
AA seq
DB search
MSVPPIAAGQPYAPPLVSHFNIPPPGFGAPGGGAGIGGPVALAAAAAANGTMVDPTATVP
PVIPAGAAGAAAAAVAAAAVPVTTAIVNEWSEHKTPEGRTYYYNSITKQSLWEKPDEMKT
PAEKQLSQCPWKEYRSDSGKLYYHNTATKESQWVAPPEYLELKEKVAAEQAAAEAAKAAA
LKTSAMASSMLMQSVVLPVVSPALAGTPATAGVAPNAVVAATAADVPLGLGGMAGVTPGS
AENSSSALDQAMAATLAAIEVPDDPVDKRQDEESQPGQTDEEPAMEFKDKKEAIEAFKEF
LKERNIPSSSSWEQCVKIIQKDPKFNVFKKLSEKKQAFNAYKTQKLKDEREEQRLKAKRS
KEELEKFLMSSDKMNSALKFYRCDELFANLDVWKSVPEQDRRDIYEDCIFNLAKREKEEA
RVMKKRNMRVLGELLEAMTTVTYQTTWSEAQVMLLDNASFKNDVNLLGMDKEDALIVFEE
HIRGLEREEDEEKEREKKRLKRQQRKNRDQFLALLDTLHEEGKLTSMSLWVELYPLISAD
LRFSAMLGQPGSTPLDLFKFYVENLKARFHDEKKIIKEILKEKEFIVVRTTTFEDFATVV
CEDKRSATLDAGNVKLTYNSLLEKAVAAEKERLKEETRRIRKLENELKGVWIEAGLSGVD
SWETAQKLVMDREVYDLYEKEDKVERLWEDFVKETEDSCSHHHSRSKKSKKSRKHKKKSR
SSSKSLSEASEVEYEKPSSKKKRRSRSRTPLTASDLSESEHELHEEPLHHHNDHHGGGGD
RLDRKRKKKKKHHRKQSRSPSYEEMLVMEKNGGGGGGGAAAAAASRSRTPSPEVEKKKKK
KDKKKKDKRRTSRSVSRASSGARIRSPLDEGRRSRGGSRSSKMADDAALSESELESQRAA
LLAQLNEQMDE
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgccgccgatagccgctggccaaccgtacgcaccgccgctggtgtcgcatttc
aacatccctccgccgggttttggtgcgcccggtgggggcgcaggcatcggtggcccggta
gcactggccgccgcagccgccgccaacgggacaatggttgatcctacggccaccgtgcca
ccggtcataccggcgggcgcagcaggagcagcagcagcagcagtagcggcagcggccgtc
cccgtgaccacggcaatcgtgaacgaatggtcggaacacaagacgcccgagggccgaacg
tactactacaacagtatcaccaagcagagcctgtgggaaaagccggacgagatgaagacg
ccggccgaaaagcagctcagccagtgcccctggaaggagtaccggtcggattcgggtaag
ctgtactatcacaacaccgccacgaaggagtcacagtgggtggcaccgcccgagtatctc
gagctgaaggagaaggtggcggctgaacaggcggctgccgaggcggccaaagcagccgcg
ctgaaaacctccgccatggccagcagtatgctgatgcagtcggtcgtgctgccggtggtt
tcgcccgccctggcagggacgccggcgacggcaggagtggcgccgaatgcggttgtggcg
gccacagccgctgacgtaccgctcggtctaggtgggatggccggcgtaacacccggatcg
gccgaaaactcttcctccgcgctggaccaagcgatggcggcaacgctggccgctatcgag
gtgccggacgatccggtcgacaagcggcaggacgaggaatcccagccgggccaaacggac
gaggagccggccatggagtttaaggacaaaaaggaagcgatcgaagcgttcaaggagttc
ctgaaggagcgcaacatcccctcgagctcgtcctgggagcagtgcgtaaagatcatccag
aaggatccgaagtttaacgtgttcaagaagctgagcgaaaagaagcaagcgttcaacgcg
tacaaaacgcagaagctaaaggacgagcgcgaggagcagcggctgaaggcgaagcggtcg
aaggaggagctggaaaagttcctcatgtcgtcggacaagatgaactcggcgctcaagttt
taccggtgcgacgagctgttcgccaacctggacgtgtggaagtcggtgccggagcaggac
cggcgcgacatctacgaggactgcatcttcaacctggccaagcgggaaaaggaggaggcg
cgggtgatgaagaagcgcaacatgcgcgtgctgggcgagctgctcgaggcgatgacgacc
gtcacgtaccagacgacctggtccgaggcgcaggtaatgctgctggacaacgcgtcgttc
aagaacgacgtcaacctgctcggcatggacaaggaggacgcactgatcgtgttcgaggag
cacatccgcgggctggagcgcgaggaggacgaggagaaggagcgcgagaagaagcggctc
aagcggcagcagcgcaaaaaccgcgaccaattcctcgccctgctcgacacgctgcacgag
gagggcaagctgacgtcgatgtcgctgtgggtggagctgtacccgctcatatcggccgac
ctgcgcttctccgctatgctcgggcagcccggctcgacgccgctggatctgttcaagttc
tacgtggaaaacctgaaggcccggttccacgacgagaagaaaatcatcaaggaaatactg
aaggagaaagagttcatcgtggtgcggacgaccacgttcgaggactttgcgacggtcgtg
tgcgaggacaagcggtcggcaacgctggacgcgggcaacgtcaagctgacgtacaactcg
ctgctggagaaggcggtcgcggccgagaaggagcggctgaaggaggaaacgcgccgcatc
cgcaagctcgagaacgagctgaagggtgtgtggatcgaggcgggcctgtccggtgtcgac
agctgggagacggcccagaagctcgtcatggaccgggaggtgtacgacctgtacgagaag
gaggataaggtcgagcggctgtgggaagactttgtgaaggagacggaagattcctgcagc
caccatcattcgcgttcgaaaaagtcgaaaaagagtcgaaagcacaagaaaaaatcgcgc
tcctcgtccaaatcgctctcggaagcatcggaagtggagtatgaaaagccttcgtcgaag
aaaaagcgtcgatcccggtcgcgaactcccctgacggcgagcgatctgtcggaaagcgag
catgagctgcacgaggaaccgctgcaccatcacaacgaccatcacggtggtggtggtgac
cgattggaccggaagcggaaaaagaagaaaaagcaccaccgcaaacagtcccgctcaccg
tcgtacgaagagatgctggtgatggagaagaatggtggcggtggtggtggcggtgcagct
gctgctgctgcatcccgttcccggacaccctccccggaggtagagaagaaaaagaaaaag
aaggacaaaaagaaaaaagacaaacgtcgaacgtctcgatcggtcagccgggctagtagc
ggcgcgcggattcgcagccccctggacgagggccgccgtagcaggggcggcagcagatct
tccaaaatggccgacgatgcggcactgagcgaatcggagctggaatcgcagcgggccgca
ctgttggcgcagctgaacgaacagatggacgagtag
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