Anopheles arabiensis: 120902365
Help
Entry
120902365 CDS
T07381
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
aara
Anopheles arabiensis
Pathway
aara04382
Cornified envelope formation
aara04512
ECM-receptor interaction
aara04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aara00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120902365
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120902365
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120902365
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aara04147
]
120902365
00536 Glycosaminoglycan binding proteins [BR:
aara00536
]
120902365
Exosome [BR:
aara04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
120902365
Glycosaminoglycan binding proteins [BR:
aara00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120902365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
120902365
NCBI-ProteinID:
XP_040166997
UniProt:
A0A182I586
LinkDB
All DBs
Position
3:28250353..28279836
Genome browser
AA seq
1813 aa
AA seq
DB search
MLWPADPTLTGGLERKDIVQRRRRSSAGSVTRGVALFVTSVLLIIQPSTAAVCNQTVCDC
KGVKGPPGQIGPHGVPGQFGDPGDIGYDGPPGLRGDRGNRGEMGTSGPKGYRGDTGERGP
LGAPGYAGLPGEPGYRGPYGIDGCNGTDGAMGTPGYPGPPGERGPQGPPGVPGPRGTSGE
GGINSKGTKGDRGVAGVPGVMGQQGWQGGRGADGFDGTTGETGDAGLDGPKGEQGEPSED
FCPGEPGDPGEPYYYLVGKNETVNIGMKGPKGDRGYDGMAGLQGMKGDSGMQGDRGQKGF
KGEEGKLGDRGKQGKEGPPGAPGDKGEKGAPGYAGLDGMPGDKGPSGDDGRPGLPGVQGP
PGPKGEYRPELAPIVIGPQGPQGDMGPPGRPGNVGIPGNKGLRGPMGPTGPPGDPGLNGR
PGPKGISPPGQRGDDGEGGPPGPLGIRGIPGLAGAKGQVGFPGRNLQGAKGEPGTNGLNG
DFGEKGDQGDDGEPGDKGLPGIGVNVTGPPGPAGLPGRAGPPGDWGFNGYNGPKGDKGLR
GDDCGTCPPGPKGVKGEDGDIGRPGLDGYDGNRGLPGPRGLQGPAGKQGLKGLLGRKGER
GDFGERGVPGEPGRPGVLRRAKNFIYLTPEMGDRGDRGQRGDQGVPGDLGDFGAVGYPGR
PGEQGEYGDDGDSGRPGLDGLPGMDGRNGAPGRDAFVNEYNIWSIRGTPGVPGDKGAKGE
RGDQGDRGEPGAMSEMTYSIAGPKGLPGVPGDVGPKGEKGYKGEMGLHGMRGQDGPAGLP
GISRQGPEGYKGYYGVIGDHGPAGMPGEDGRPGPDGMPGLQGLRGQRGDPGRPILMGEKG
VEGEGGFYGEIGDKGFKGPEGIRGTTGMPGVKGERGDPGPLGKPGLRGNKGLMGDIIYGD
RGAPGLPGRDGLQAPYGDKGERGEPGMEGFPGPKGERGEIGRDGLPGLPGDDGLPGERGL
QGRMGDMGEEGYQGERGPTGDPGYPGLTGARGLAGLRGLAGPTGDPGDMGFPGRDGAPGR
KGERGDFGDVGPRGRKGSASFSGMKGENGEPGMMGPPGYNARPGQMGRKGEEGDAGQVID
GYPGVKGQKGAPGFPGIPGRPGAKGERGDVGVFGPKGISGDKGRDGYPGIAGRPGRPGPR
GPLGPRGEQGSRGETGEPGEDGLRGYAGEKGLRGDVGPVGPTGLTGMVGDPGLPGIPGNV
MMRSAQQGDRGDPAPEGPEGDEGPPGLKGQRGYPGRKGEQGLPGFVGMVGIEGHDGPKGQ
RGDPGMKGQPGELETRPERGDQGDAGYDGLTGRPGLPGNKGAPGDYGDNGPMGLAGMPGF
VNGALKGMRGDTGYEGAPGLDGLPGLPGLDGVMGPAGPRGMPGSIGAIMPGFRGDPGEDG
LPGLDGMVGPPGFPGDRGLTGLPGLRGLPGPKGLQGEVGLEGYHGMVGLKGMKGEVGDLP
NLSNWRPTQPGDRGTPGLRGEPGDEGDMGPPGYPGSRGPKGMQGLQGEQGATGEVGFKGE
QGIAGAPGRSGIEGLPGLPGLPGEPAAPPPPPKNLGYLFARHSQKVTIPECPINTYKLWD
GYSLVNVIASSRSVGQDLGAAGSCLRRFSTMPFMFCDINNVCNYASNNDDTIWLATPEPM
PMSMAPIPADQVERYISRCSVCESNTRVMALHSQSMSIPDCPEGWEELWLGYSYAMHTSD
NSGGFGQDFVSPGSCMEEFRPQPVIECHGHGTCNFYDGISSFWLTIIDDAMQFNRPQPQT
LKAHQTSKVSRCIVCRRKAGIMRTLHGGSTITASALRRANTSTVYPPPPPQPAPGSRRRV
SPGRQRNRNRYQG
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggcccgcggaccccacgctcacggggggtctggaacgtaaggacatcgtccaa
cggaggcgccgaagctctgctgggtcggtgacgcgcggtgtggcgcttttcgtcacttcg
gtgcttctgataatacagccatcaacggcagcggtctgcaaccagacggtatgtgactgt
aaaggagtgaagggaccgccgggacagattgggccgcacggtgtaccagggcagtttggc
gatccgggcgatattgggtacgatgggccgccgggactacgcggcgatcgtggaaatcga
ggcgaaatgggcacgagtggaccgaaaggatatcgtggtgacactggcgagcgaggaccg
ctgggagccccgggctatgcgggacttccgggcgaacccggctaccgcggcccgtacggt
atcgacggatgcaacggcacggacggtgcgatgggaacacccggctacccgggaccacct
ggcgagcgtggcccccaaggtcctccaggtgtgcccgggccgcgtggtacctccggcgaa
ggcggtatcaactccaagggcaccaagggcgatcggggcgtggccggcgttcccggtgtg
atgggccagcagggctggcagggtggccgcggtgcggacgggttcgatgggacgaccggc
gagacgggcgatgccggactggatggccccaaaggcgagcagggcgaaccgagcgaagac
ttctgcccgggcgaaccgggcgatccgggcgaaccgtactactacctggtcggcaaaaac
gaaacggtcaacattggcatgaagggcccgaagggtgaccggggctacgatggaatggcc
ggactgcagggcatgaagggcgactcgggcatgcagggcgaccggggccagaaaggcttc
aagggcgaggaaggcaagctcggcgatcggggcaagcagggcaaggagggaccgccgggc
gcaccgggcgacaagggcgaaaagggtgcgcccgggtacgccggactggacggtatgccg
ggcgacaagggcccctcgggagacgatggacggccggggctgccgggtgtgcagggaccg
ccgggaccgaagggcgaatatcgtcccgagctggcaccgattgtgattggaccgcaggga
ccgcaaggtgacatgggaccaccgggccggccgggcaacgtcggcatccccggcaacaag
ggcttgcgcggccccatgggtccaacgggtccgcccggcgatccgggactgaatggacgg
cccggcccgaaaggcatctcgccgccaggacagcgcggtgacgacggcgagggaggacca
ccgggaccgctcggcatccgaggcataccggggctggcgggcgcaaagggacaggtcggt
ttcccggggcgcaatctgcagggcgccaagggcgaacccggcacgaacgggctgaacggt
gactttggagagaagggcgaccagggcgacgatggcgaaccgggcgacaagggtctgccc
ggcatcggtgtgaacgtgacggggccacccggaccggccggactgcctggcagggcggga
ccgcccggcgactggggcttcaacggatacaatggcccgaaaggtgacaaaggtttgcgc
ggcgacgactgtggcacgtgcccgcccggaccgaagggcgtcaagggcgaggacggtgat
atcgggcggccgggattggacggatacgacgggaatcgggggctgccggggccgcgcggc
ttgcagggtccggccggaaagcaaggcttgaagggactgttgggccgtaaaggcgaacgg
ggcgactttggcgaacgtggtgtaccgggcgaaccgggacgaccgggtgtgctgcgacgg
gcgaaaaacttcatctatctgacgccagaaatgggcgatcgaggcgacagagggcagcgc
ggcgatcaaggtgttccgggcgacttgggcgactttggagctgttggatacccaggacgg
ccgggcgaacagggcgaatacggtgacgacggtgactcgggccggccgggtctggacggg
ctgccgggcatggacggtcgcaacggtgcgccgggtcgggatgcgttcgtcaacgagtac
aacatctggtctattcgcggcacacctggtgtaccgggcgacaaaggtgccaaaggagag
cgcggtgaccagggagatcggggcgagccgggcgccatgtcggagatgacgtacagcatc
gcgggcccgaagggcttgccgggagtgcccggcgacgtcggccccaagggcgaaaagggc
tacaagggcgaaatgggattgcacggaatgcgcggtcaggatggaccggccggactgccc
ggcatcagccgtcagggaccggagggctacaagggctactacggcgtgatcggtgaccac
gggccggccggcatgccgggcgaagatggccgtcccggaccggacgggatgcccggtctg
caggggctgcgcggccagcgcggtgacccgggccgaccgatactgatgggcgaaaagggc
gtggaaggcgagggcggcttctacggcgaaatcggcgacaaaggcttcaagggcccggaa
ggtatccgcggcacgaccggaatgccgggagtgaagggagagcggggcgatccgggcccg
ctcggcaagccgggcctgcgcggcaacaagggcctgatgggtgacatcatttacggcgat
cgtggagcgccgggcctgccgggccgcgatggtctgcaggcaccgtacggcgacaagggc
gaacggggcgaaccgggcatggaaggtttccccgggcccaagggcgagcggggcgaaatc
ggacgcgacggactgcccggactgcccggcgacgatggactgccgggcgagcgcggcctg
cagggacgcatgggcgatatgggcgaggaaggctaccagggcgaacggggaccgacgggc
gatccaggctatcccggtctgaccggcgcccgcggactggcgggactgcgcgggctggcc
ggcccgaccggcgacccgggcgacatgggcttcccggggcgcgacggagcaccgggccgg
aagggcgagcgcggtgactttggcgatgtgggaccgcgcggacgcaagggcagcgcctcg
ttcagcggcatgaagggcgaaaacggcgagccgggcatgatgggcccgcccgggtacaac
gcacgccccggccagatgggtcgcaagggcgaggagggagacgccggccaggtcatcgac
ggatatccgggcgtgaagggacagaagggcgccccgggcttccccggcatcccgggccga
ccgggtgcgaagggcgagcgaggagatgtcggcgtgttcggcccgaagggtatttccggc
gacaagggacgcgatggctatccaggcattgccggacgcccgggacggcccggaccgcgt
ggaccgttgggcccgcgaggagagcaaggatcgcggggcgaaacgggcgaaccgggcgag
gacggactgcgaggctacgccggcgaaaagggactgcgcggtgacgtcggtccggtcgga
ccgaccggtttgactggaatggtgggcgaccccggacttcccggcatccccggcaacgtt
atgatgcgctcggcccagcaaggcgaccgcggtgaccccgcccccgagggtccggaagga
gacgagggaccgccgggactgaagggccagcgaggctacccgggccggaagggcgaacag
ggactgcccggattcgtcggcatggtcggcatcgagggacacgacggacctaagggacag
cgcggcgaccccggcatgaagggacagccgggcgagctggaaacgcgccccgagcgcggc
gaccagggcgacgctggctacgatggactgaccggacggcccggcctgcccggcaacaag
ggagcgccgggcgactacggcgacaatgggccgatgggactggccggcatgccaggcttc
gtgaacggtgcgctgaagggcatgaggggtgacaccggctacgagggagcccccgggctg
gacgggctgcccggcctgcccggcctggacggtgtgatgggtccggccggaccgcgcggt
atgcccggcagcatcggcgccatcatgcccggcttccggggcgatccgggcgaggacggg
ctaccggggctggacggaatggtcggcccgcccggcttcccgggcgaccggggactgacg
gggctgccgggactgcgcggactacccgggccgaagggtctgcagggcgaggtcggactc
gaaggctaccacggcatggtgggcctgaagggcatgaagggcgaggtgggcgatctgccc
aacctgtccaactggcggccgactcaaccgggcgaccggggcacgcccggactgcgcggc
gagcccggcgacgaaggtgacatgggcccgccgggctacccgggcagccggggacccaag
ggcatgcagggactgcagggcgagcagggcgctacgggcgaggtcggcttcaagggcgag
cagggcattgccggtgcccccggacggagcggtatcgagggactgccggggctgccggga
ttgccgggcgagccggcggcaccaccgccaccgcccaaaaacttgggctacctgttcgcg
cgccactcgcagaaggtgaccatcccggagtgcccgatcaacacgtacaagctgtgggac
gggtactcgctcgtgaacgtcatcgctagcagccggtcggtggggcaggatctcggtgcg
gccggatcgtgcctgcggcgcttcagcaccatgccgttcatgttctgtgatattaacaac
gtctgcaactacgcctcgaacaacgacgacacgatctggctggcgacgcccgaaccgatg
ccgatgtcgatggcaccgatcccggccgaccaggtcgagcggtacatctcgcgctgcagc
gtgtgcgagtcgaacacgcgcgtcatggcgctgcacagccagtcgatgagcataccggac
tgtccggaaggatgggaggagctgtggcttggctacagttatgcaatgcacacgtcggac
aactcgggcggcttcggtcaggactttgtgtcgcccggctcgtgcatggaagagttccgg
ccgcagcctgtcatcgagtgccacgggcacggtacgtgcaacttctacgacggtatctcc
tccttctggctgacgatcattgacgacgcgatgcagttcaaccggccccagccgcaaacg
ctaaaggcacaccaaacgagcaaagtgagccgctgcatcgtttgccgtcgaaaggcaggc
atcatgcggacactgcacggtggcagcacgataacggcgtcggcccttcgcagagcgaat
acgtctacggtgtacccgccaccgccaccacagccggcaccaggctctagaagacgggtg
tccccgggtcggcagcgtaaccgcaaccgctaccagggctag
DBGET
integrated database retrieval system
