Anopheles arabiensis: 120902808
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Entry
120902808 CDS
T07381
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
aara
Anopheles arabiensis
Pathway
aara03020
RNA polymerase
aara03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aara00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120902808
09124 Replication and repair
03420 Nucleotide excision repair
120902808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aara03021
]
120902808
03400 DNA repair and recombination proteins [BR:
aara03400
]
120902808
Enzymes [BR:
aara01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120902808
Transcription machinery [BR:
aara03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
120902808
DNA repair and recombination proteins [BR:
aara03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
120902808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
120902808
NCBI-ProteinID:
XP_040167755
UniProt:
A0A2C9GSB4
LinkDB
All DBs
Position
2:complement(39999146..40003099)
Genome browser
AA seq
1175 aa
AA seq
DB search
MYENEEDHFEEEDPEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPAIELTAEAQHSSGEIENPTRYLLKFDQIYLSKPTHWEKDGSPSPMMPNEARLRNLTY
SAPLYVDITKTKLVEGQDPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKTEIRSCLEHSSRPTSTLWVNMM
ARGGQSIKKSAIGQRVIAILPYVKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQ
KFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGSLLLRKNHIDMLKDRDYNNYGWQVLVASG
VVEYIDTLEEETVMIAMTPYDLKQDKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRIGDQEEQFEKPNRQTCQG
MRNALYDKLDEDGIIAPGLRVSGDDVVIGKTITLPETDDDLDGTTKRYTKRDGSTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GITPDIIINPHAIPSRMTIGHLIECIQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEYG
YHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKG
CKNKTQISQVKLPYAAKLLFQELMAMNIAPRLMVL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtacgagaatgaagaggaccacttcgaggaggaagatccggaggagatttcgcacgag
ctgtggcaggaagcatgctggatcgtgatcaacgcttacttcgacgagaagggtctcgtg
cggcagcagctggacagcttcgacgagttcatccaaatgtccgtccagcgcatcgtcgag
gactcgccggccatcgagctgacggccgaagcgcaacattcgtcgggcgagatcgaaaac
ccgacgcgctacttgctcaaattcgaccagatctacctgtcgaaaccgacgcactgggaa
aaggatggttccccttcgccgatgatgccgaacgaggcacgcctacgcaaccttacctac
tcggctccgctctacgtggacatcaccaagacgaagctggtcgagggccaggatccggta
gaaacgcagcatcagaaaacgttcatcggcaagattccgatcatgctgcggtccacgtac
tgtctgctctcccagctgacagatcgtgatttgacggagctgaacgagtgtcccctcgat
ccaggcggctacttcatcatcaacggctcggagaaggtactgattgcgcaggaaaagatg
gccaccaacacggtgtacgtgttcagcatgaaggacggcaagtacgcgtacaagacggag
atccggtcctgtctggagcacagctcccggcccacctcgacgctgtgggtgaacatgatg
gcacgcggcggtcagagcatcaaaaagtccgccatcggccagcgcgtgatagcgatcctg
ccgtacgtgaagcaggagataccgatcatgatcgtgttccgtgcgctcggattcgtcgcc
gaccgggacatcctcgagcacatcatttacgactttgacgatccggaaatgatggagatg
gtaaagccctcgctggacgaagcgttcgtcgtacaggagcagaacgtggccctcaatttc
atcggagcgcgcggtgctcggcccggcgtcaccaaggacaagcgtatcaagtacgcgaag
gaaattctgcaaaaggaaatgttgccccacgttggtgtgtccgatttttgcgaaaccaag
aaggcgtacttcctcggctacatggtacatcggttgctgctggctgcgctcggacgccgc
gaactggacgatcgtgatcactacggcaacaagcgtctcgatctggccggtccgttgctc
gcgttcctgttccgcgggctgttcaagaacctgatgaaggaggtgcgcatgtacgcacaa
aagttcattgatcgcggaaaggactttaaccttgagctggccatcaagacgaagatcatt
acggacggattgcgctactcgttggccaccggtaactggggcgatcagaagaaggcccat
caggctcgggccggtgtgtcgcaggtgttgaatcgcctgacgttcgcctcgacgctcagc
catttgcggcgcgtcaattcaccgatcgggcgtgacggcaagttggccaaaccccgccag
ctccacaacaccctgtggggcatgatctgtccggccgaaacgccggaaggagcagccgtc
gggctggtgaagaacctggcgctcatggcgtacatttcggtcggttctcagccgtctccg
attctcgagttcttggaggagtggtccatggaaaacttggaagaaattgccccctcggcg
attgccgacgcgaccaagatctttgtgaacggttgctgggtcggcattcatcgcgatccg
gagcagctgatggccacgctgcggaagctgcgccgacagatggatattattgtgtcggaa
gtatcgatgattcgcgatatccgcgaccgtgagatccgcatctacaccgatgcaggtcgc
atctgtcgtccgctgctgattgtggagaatggatcgctgctgctgcgcaaaaatcacatc
gacatgttgaaggaccgcgactacaacaactacggctggcaggtgctggttgcttccggt
gtggtggagtacattgacacgctggaggaggaaacggtcatgattgcgatgacaccgtac
gatctgaaacaggacaaggagtacgcctactgtacaacctacacgcactgcgagatccat
ccggcgatgattttgggcgtctgcgcttccatcatcccgttcccggatcacaaccagagt
ccgcgtaacacctaccaaagcgctatgggtaagcaggcgatgggtgtgtacatcacgaac
ttccacgtgcgcatggacacgctcgcgcacgtgctttactacccgatgaagccgctcgtg
acgacgcgttcgatggagtatcttcggttccgtgagctgccggccggtatcaattcgatc
gtggccatcctgtgctacacgggctacaaccaggaggacagcgttatcctgaacgcgtcc
gccgtcgagcgtggcttcttccggtccgtgttttaccgctcgtacaaagactcggaaagc
aagcgcatcggcgatcaggaggagcagttcgagaagccaaaccggcagacgtgccagggc
atgcggaacgccctgtacgacaaactggacgaggacggtatcattgcgccggggctgcgt
gtgtccggagatgatgtggtgattggcaaaacgattaccctgccggaaacggacgacgat
ctggacggaaccaccaagcgctacaccaagcgagacgggtcaacgtttttgcgcaactcc
gagaccggtatcgtcgatcaggtgatgctgacgctcaacagcgagggctacaagttctgc
aagatccgtgtgcgctcggtgcgtatcccgcagatcggcgacaagtttgcgtcgcgccac
ggacagaaaggtacgtgcggtatacagtatcgccaggaggacatgccgttcacgtgcgag
ggcattacgccggacatcatcattaatccgcacgccatcccgtcccgtatgaccattggg
catttgatcgagtgcatccagggcaagctgggctcgaacaagggcgaaatcggcgacgcc
acgccgttcaacgatgcggtcaatgtgcagaagatctccaccttcctgcaggagtacggc
taccatctgcgcggcaacgaggtcatgtacaatgggcacacggggcgcaagattaacgcg
caggtgttcctcggcccgacctactaccagcgtctgaagcatatggtggacgacaaaatc
cattcgcgagcccgcggtccggtgcaaattttggtccgacagcccatggagggtcgtgca
agggacggcggtctacgtttcggtgagatggagcgcgattgtcaaatttcgcacggtgcg
gcacagtttctgcgcgagcgtctgttcgaggtgtccgacccgtaccggattcacgtgtgc
aacttctgtggcctgatcgcgatcgccaatctgcgcaacaacacgttcgagtgcaaggga
tgcaaaaataagacacagatatcgcaggtgaagctcccatacgcggcaaagctcttattc
caggaactaatggcaatgaacattgcacctcgtttgatggtactataa
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