Anopheles arabiensis: 120903202
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Entry
120903202 CDS
T07381
Name
(RefSeq) exosome RNA helicase MTR4
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
aara
Anopheles arabiensis
Pathway
aara03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aara00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120903202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aara03019
]
120903202
03041 Spliceosome [BR:
aara03041
]
120903202
03009 Ribosome biogenesis [BR:
aara03009
]
120903202
03016 Transfer RNA biogenesis [BR:
aara03016
]
120903202
Enzymes [BR:
aara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120903202
Messenger RNA biogenesis [BR:
aara03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
120903202
Spliceosome [BR:
aara03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
120903202
Complex C
U4/U6.U5 tri-SnRNP related factors
120903202
Ribosome biogenesis [BR:
aara03009
]
Eukaryotic type
Pre-60S particles
Helicases
120903202
Transfer RNA biogenesis [BR:
aara03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
120903202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
ResIII
Helicase_C
nSTAND3
Death_3
ATPase_2
Motif
Other DBs
NCBI-GeneID:
120903202
NCBI-ProteinID:
XP_040168415
UniProt:
A0A182ICM7
LinkDB
All DBs
Position
3:complement(36262356..36265873)
Genome browser
AA seq
1036 aa
AA seq
DB search
MSNVDDLFSVFDEQNDDDNGPVPVVEPASSAPAKQPSNDAATSKKRESTTAAPKRELEVV
DVLSDEEQVAKKAKVESILDDINLDNIESRIKVHTIQSPEACTHEVAVYPDQKYMPLAPA
TGKPAKEYAFVLDPFQKEAILCIENNQSVLVSAHTSAGKTVVAEYAIAKSLADKQRVIYT
TPIKALSNQKYREFHEEFKDVGLVTGDVTINPSASCLIMTTEILRNMLYRGSEIMREVGW
VIFDEIHYMRDKERGVVWEETLILLPDNVHYVFLSATIPNARQFAEWVCHLHKQPCHVVY
TDYRPTPLQHYLFPAGGDGIHLVVDERGQFKEDNFNTAMNVLQTAGEAAKGDQKGRKGGL
KASNAGETNIFKIVKMIMERSFAPVIIFSFSKKDCEVYAMQMAKLDFNSSTEKKLVDEVF
NNAMDVLTEEDRQLPQVENVLPLLRRGIGIHHGGLLPILKETIEILFGEGLIKALFATET
FAMGLNMPARTVLFTSPRKFDGKDFRWVTSGEYIQMSGRAGRRGLDDKGIVILMIDEAVS
PAVGKDIVQGRADPINSAFHLTYNMVLNLLRVEEINPEYMLERSFFQFQNQSSIPEIYKR
VQKKQKQLLAVEIKDEQSIISYHHVREQLDRLGQEFREYITRPVYLVPFLQPGRMIKIQS
DAGEFEWGIIVNFKKENADSKQNPLKTEQKVVIDVLLHVADGFEKEGIPKPCPPGKRGSV
EVVPVLHKLVSRISSLRVYYPNDLRPADNRRSVLKTIEEVKKRFPQGPPLLNPITDMHIK
EKEFQGIVDMIDKFEKRLFAHPLHESAGLERLYAQYMSKLELEKELRNEKNALREARSLL
QMSELKHRKRVLRRLGYCTAADVIEFKGRVACELSCADELLITEMVFNGTFTDLTPSQSC
ALLSCFVCDEKSSEMPAATHELSGPLRQMQDLARRIAKVSNECKVEVDEERYVESFKPFL
MDVVLCWCKGASFAQLCKMTDIFEGSIIRCMRRLEELLRQMVQASKTIGNTDLENKFSEA
IRLLKRDIVFAASLYL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgtggacgatttgttcagtgtgtttgacgagcagaacgacgacgacaatggg
cccgtgccggtggtcgaaccagcgtcctcggcaccggccaagcagccaagcaacgatgcg
gcgaccagcaagaaaagagagtcaacaaccgcagctcctaagcgtgagctggaggtggtg
gatgtgctgagcgacgaggaacaggtggcgaaaaaggcaaaggtggaatcgatactggac
gatatcaacttggacaacattgaaagtcgcatcaaggtacacacgatacagtcgccggag
gcatgcacacacgaggtggccgtttacccggaccagaagtacatgccgctcgcaccggcc
accggtaaaccggcgaaagagtacgccttcgtgctggatccgttccagaaggaagcgatc
ctgtgcatcgagaacaatcagtccgtgctggtgtcggcccacacgtccgccggcaagacg
gtggtggccgagtacgcgatcgcgaaatcgctcgcggacaagcagcgcgtcatctacacc
accccgatcaaggccctttccaaccaaaagtatcgcgagtttcacgaagagttcaaggac
gtcggtctggtgacgggcgacgtgacgatcaatccgagcgcctcgtgcctgatcatgacg
acggaaattctgcgcaacatgctgtaccgtgggtcggagattatgcgcgaggtcggttgg
gtgatattcgacgaaatccattacatgcgcgacaaagagcggggcgtggtgtgggaggaa
acgctgatcctgctgccggacaatgtgcattacgtgtttctgtccgccacgataccgaac
gcgcgccagttcgccgagtgggtgtgccatctgcacaagcagccgtgccacgtggtgtac
acggactatcggccgacgccgctgcagcactacctgtttccggccggtggcgacgggata
catttggtggtggacgagcggggccagtttaaggaggacaactttaacacggcaatgaat
gtgctgcaaacggcgggcgaagcggccaagggtgaccagaagggcaggaagggtggcctg
aaggcttcgaatgcgggcgaaacgaacatcttcaagatcgtgaagatgatcatggagcgc
agctttgcgccggtcatcatattctcgttcagcaagaaggactgcgaggtgtacgcgatg
cagatggccaagctggactttaactcgagcacggagaagaagctggtggacgaggtgttt
aacaacgcgatggacgtgctgacggaggaggaccgtcagctgccgcaggtggagaatgtg
ctgccactgttgcgccgcggcatcggcatccatcacggtggactgttgcccatactgaag
gaaacgattgaaatcctgtttggcgaagggttgataaaggcactgtttgcgacggaaacg
ttcgcgatggggctgaacatgccggcccgcacggtgctgttcactagcccgcgcaagttc
gacggcaaggacttccgctgggtgacgtcgggcgagtacatccagatgtcgggccgggcg
ggacgacgcggcctggacgacaagggtatcgtcatcttgatgatcgacgaggccgtgtcg
cccgcggtcggcaaggacattgtgcagggccgggcggatccgatcaattccgcgttccac
ctgacgtacaacatggtgctgaacttgctgcgcgtggaagagatcaacccggagtacatg
ctggaacggtcgttcttccagtttcagaaccaatcgtctataccggaaatttacaagcgc
gtgcagaagaaacagaagcaactgctggcggtagagatcaaggacgagcagtcgatcatc
tcgtaccaccacgtgcgggagcagctcgatcggctggggcaggagttccgcgagtacatc
acgcggccggtctatttggtgccgttcctacagccgggccgcatgataaagattcaatcg
gacgcgggagagttcgagtggggcatcatcgtgaactttaagaaggagaacgccgactcg
aagcagaatccactcaagacggagcagaaggtggtgatcgatgtgttgctgcacgtggcc
gatgggttcgagaaggagggcatcccgaaaccgtgcccaccgggcaagcgcggctcggtc
gaggtcgttccggtgctgcacaagctcgtgtcgcgcattagctcgctgcgcgtttactac
ccgaacgatctgcgcccggcggacaatcgccgctcggtgctgaaaacgatcgaggaggtg
aagaagcgtttcccgcagggtccgccactgctgaacccgatcaccgatatgcacatcaag
gagaaagagttccagggcatagtggacatgatcgacaagttcgagaagcgcctgttcgct
cacccgctgcacgagtcggccgggctcgagcggctgtacgcgcagtacatgagcaagctg
gagctggagaaggagctgcgcaacgagaagaatgcgctgcgtgaagcgcgcagcctgctg
cagatgagcgagctgaagcaccggaagcgggtgctgcgacgattgggctactgtacggcg
gcggacgtgatcgagttcaaggggcgcgttgcatgcgagctgagctgcgcggacgagctg
ctcatcaccgagatggtgtttaacggtacgtttaccgacctgacgccgtcgcaatcgtgc
gccctgctgagctgcttcgtgtgtgatgagaagagcagcgaaatgccggccgcgacccat
gagctgtccggtccgctgcggcagatgcaggatctggcacggcgcattgcgaaggtgtcg
aacgagtgcaaggtggaggtggacgaggagcgctacgtggagtcgttcaaaccgttcctg
atggatgtggtgctgtgctggtgcaagggcgcctcgttcgcgcagctctgcaagatgacg
gacatcttcgagggctccatcattcgctgtatgcgccggctggaggagctgctgcgccag
atggtgcaggcgtcgaaaacgatcggcaacacggatctggagaataagttctccgaagcg
atccggttgctgaagcgtgatatcgtgtttgctgcctcgctctacttgtag
DBGET
integrated database retrieval system
