Anopheles arabiensis: 120903657
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Entry
120903657 CDS
T07381
Name
(RefSeq) RNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
aara
Anopheles arabiensis
Brite
KEGG Orthology (KO) [BR:
aara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aara03016
]
120903657
Enzymes [BR:
aara01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
120903657
Transfer RNA biogenesis [BR:
aara03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
120903657
Prokaryotic type
tRNA splicing ligases
120903657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-GeneID:
120903657
NCBI-ProteinID:
XP_040169152
UniProt:
A0A182HUL8
LinkDB
All DBs
Position
3:6203431..6205223
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AA seq
506 aa
AA seq
DB search
MVVREYNEEMKYIERLSPNSFLIKKGFQSNMNVEGIFYANSRLEKLMFDELRNACRPGMT
GGFLPGVKQIANVAALPGIVGRSVGLPDIHSGYGFAIGNMAAFDMSDPTSIVSPGGVGFD
INCGVRLLRTNLFEKDVQPVKEQLAQSLFDHIPVGVGSKGIIPMNAHDLEEALEMGMDWS
LREGYVWAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVEEIYD
KYAASKMGIEELGQICVMIHSGSRGFGHQVATDALVEMEKAMKRDKIETNDRQLACARIN
SPEGQNYLKAMSAAANFAWVNRSSMTFLTRQAFAKQFNTTPDDLDMHVIYDVSHNVAKME
EHMVNGRPKQLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLVGGSMGTCSFVLTGTETGM
VETFGSTCHGAGRSLSRAKSRRNLDYKDVLRDLEEKGISIRVASPKLVQEEAPDSYKDVR
DVVQTCHDVGISNKAIKLRPIAVIKG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggttgtccgagagtacaacgaggagatgaagtacatcgagcggctttcgccgaacagc
ttcctcatcaagaaaggcttccagtcgaacatgaacgtcgagggcatattctacgcaaac
agccggctggagaagttgatgttcgacgagctgcgcaatgcctgccggcccggaatgacc
ggcggatttcttcccggcgtgaagcagattgcaaacgttgctgccctgcctggcatcgtt
ggacgctccgttggacttccggacattcactcagggtatgggttcgccatcggcaacatg
gccgcgttcgatatgagcgatccgacctcgatcgtgtcgcccggtggcgttggattcgac
atcaactgtggcgtgcgtctgcttcgcacgaacctgttcgagaaggacgtgcagccggta
aaggagcagctcgcccagagcctgttcgatcacattcccgtgggtgtaggttctaagggt
atcattccgatgaacgcacacgatctggaggaagcgctcgaaatgggcatggattggtcg
ctgcgcgaagggtacgtttgggcggaagacaaagagcactgcgaagagtacggacgaatg
ctgaacgccgacccgagcaaggttagtctgcgggcgaagaaacgtggcctgccgcagctc
ggaacgctcggagccggcaaccattacgccgagatacaggtggtggaagaaatttacgac
aaatacgccgccagcaagatgggcatcgaggagctgggccagatctgcgtgatgatccat
tccgggagccgcggtttcggccatcaggtcgctacggacgcgctggtcgagatggagaaa
gcgatgaagcgggacaaaatcgaaacgaacgatcggcagctcgcctgtgcccgcatcaac
agtcccgagggtcagaactacctgaaagcgatgtcggcggcggccaactttgcctgggtc
aaccggagctcgatgacgttcctgacgcggcaagcgtttgcgaaacagttcaacaccacg
ccggacgatctggacatgcacgtcatttacgacgtgtcgcacaacgtggccaagatggag
gaacacatggtgaacggccgaccgaagcagctgctggtgcaccggaagggatcgacgcgt
gcgttcccgccgcaccatccactgattccggtcgattatcagcttaccggccagccggtg
ctggtgggcggttcgatgggcacgtgcagcttcgtgctgaccggtaccgagacgggcatg
gtggaaacgttcggctcgacgtgtcacggagccggtcgcagcttgtcgcgtgctaaatcg
cgccgcaatctggactacaaggacgtgctgcgggatctggaggagaagggcatttcgatt
cgtgtcgcgtcgccaaagctggtgcaggaggaagcgccggattcgtacaaggatgtgcgg
gatgtggtgcaaacgtgccacgatgtaggcataagcaataaggccatcaaattgcgtccg
atcgcggttattaagggataa
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