Anopheles arabiensis: 120904682
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Entry
120904682 CDS
T07381
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
aara
Anopheles arabiensis
Pathway
aara03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aara00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120904682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aara03019
]
120904682
Messenger RNA biogenesis [BR:
aara03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
120904682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
PIN_4
CSD2
Rrp44_S1
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
120904682
NCBI-ProteinID:
XP_040170821
UniProt:
A0A182HP02
LinkDB
All DBs
Position
2:75320234..75323458
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AA seq
967 aa
AA seq
DB search
MLTNKVFMKKTKRGNILKIVREHYLRDDIWCGSAACQTCPAEENAALLDEVPEPVSERFA
FPHYLLLDTNVILYQMDLLEESAIRNVIILHTVLDEVKHRSAVVYRRLRAVLSDPARKFY
TFVNEHHKDTYVEREPGESANDRNDRMIRTAAEWYGKHLAPRVGKKSAQAGVRIVLLSDD
ADNRAKAMALGLNTCSALEYMKAAKATFAHLLDKIAQRELVSESKDPLFPSHLTMLQIHE
GIKGGKLMQGGFLASRENYLEGYVRVEGIEKAVLIQGRMNLNRAVDGDTVAIEMLPESEW
KAPSDVVLVDEQTDPGDMVEPDPTFSVKPLAEREPTAKVVGIIKRKWRQYCGILLPSHIQ
GSTRHIFVPAERKIPRIRIETRQAATLLSQRIIVAIDQWPRHSRYPQGHFVRALGPIGSK
ETENEVILLEHDVPHSRFSEDVLACLPELPWTITAADLQRRVDLRGITVCSVDPPGCTDI
DDALHARRLPNGNIEVGVHIADVGHFIRPGTALDREAASRATTVYLVDKRIDMVPGLLSS
NLCSLRGGEERFAFSCIWELDDEANIRNTRYHKSVIKSKSALTYEEAQIIIDDAKQTNDV
ATSLRLLNRLAKILKKRRTEKGALVLASPEIRFQVDSETHDPIDVKAKQLLETNSMVEEF
MLLANVSVAEKIEQEFPECAMLRRHPCPPQANYEPLVKAAEHQGFEILTTSGKELATSLD
KAVKPDNPYFNTMLRILATRCMMQAVYFISGTVQRDEFFHYGLAAPIYTHFTSPIRRYAD
IIVHRLLAACIGADSTYPELLDKKVNSNLCNNLNYRNRMAQYAGRASVALHTHLFFRKRS
EDEQAYILFIRKNALQILVPKYGFEGTIYVTGRNNEEIKTGVRFVYDEEQQTQRCGQVVF
RAFDPVIVRLSLDSTNVQHEKLVFELVKPYIEGFSVKAQDAAAEVETPKRKGEPQQTTKS
KKNKKAK
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgttgacaaacaaagtgtttatgaaaaaaacgaaacgcggcaatattctgaaaattgtc
cgcgagcactacctgcgcgatgatatctggtgcggctcggccgcctgccaaacctgccca
gcggaggagaacgcggcgctgctggacgaggtgccggaaccggtgagcgagcggttcgcc
tttccgcactatctgttgctcgacacgaacgtcatactctaccagatggacctgctggag
gagagcgcgatccggaacgtgatcatcctgcacacggtgctggacgaggtgaagcatcgc
agcgcggtcgtgtacaggcggctccgggccgtgctgtccgatccggcccgcaagttctac
acgttcgtgaacgaacaccacaaggatacgtacgtggagcgggaaccgggcgagtcggcg
aacgaccgcaacgatcgaatgattcggacggcggccgaatggtatgggaagcatcttgcc
ccacgggttggcaagaagtcggcccaggcgggcgtacgcatcgtgctgctgtcggacgac
gcagacaatcgtgccaaagcgatggcactcgggctgaacacgtgctcggccttggagtac
atgaaggcggcaaaggccacgtttgcccatctgctggacaagattgcccagcgtgagctg
gtgagcgaatcgaaggatccactgtttccttcccatctcacgatgctgcagatacacgag
ggcatcaagggcgggaagttgatgcagggcgggtttttggcgtcacgcgaaaattacctc
gaggggtatgtgcgggtcgagggtatcgagaaggcggtactgattcagggacgcatgaac
ctgaaccgtgccgtcgatggagatacggtcgcgatcgagatgctgcccgaaagcgaatgg
aaagcgccgagcgatgtggtgctggtagacgagcagaccgacccgggcgacatggtcgaa
ccggacccgacgtttagcgtgaagccgctggcggaacgcgaaccgaccgccaaggtggtc
ggcatcattaagcgcaagtggcgccagtactgtggcatactgctgcccagccacatccag
ggctcgacgcgccacatcttcgtgccggcggagcgcaagataccgcgcattcggatcgag
acgcgccaggcggcgacgctcctgtcccaacgcatcatcgttgcgatcgaccagtggccc
cggcactcgcgctacccgcagggccatttcgtgcgcgccctcgggccgatcggctcgaag
gaaacggaaaacgaggtcatcctgctggagcacgacgtgccacacagccgcttctcggag
gacgtgctggcctgcctgcccgagctgccgtggacgatcacggctgcggatctgcagcgg
cgggtggacctgcgcggcatcaccgtctgttcggtcgatccgcccggctgtacggacatt
gacgatgcgctgcacgcgcgccgtctgcccaacggaaacatcgaggtcggcgtacacatc
gcggacgtgggccacttcatacggccgggcacggcgctcgaccgggaagcggcatcgcgg
gccaccaccgtctacctggtggacaagcgcatcgacatggtgccgggactgctcagctcc
aacctttgctcgctgcgcggtggcgaggaacgtttcgcgttctcctgcatctgggagctg
gacgacgaggccaacatccggaacacccggtaccacaagagcgtgatcaagtcgaaaagt
gcgctcacgtacgaggaggcccagatcatcatcgacgatgcgaagcagacgaacgacgtg
gccacctcgctgcgcctgctgaaccggctggcgaaaatattgaaaaagcggcgcacggaa
aagggcgccctcgtgctggcgtcgcccgaaattcgcttccaggtggacagcgaaacgcac
gatccgatcgacgtgaaggcgaagcagctgctggaaaccaactcgatggtggaagagttc
atgctgctcgcgaacgtctcggtcgcggaaaagatcgaacaagagttccccgagtgtgcg
atgctccggcggcatccctgtccgccgcaggccaactacgagccactagtgaaggcggcg
gagcatcagggcttcgagatactgaccacgagcggcaaggagctggccaccagcctggac
aaggcggtcaagccggacaatccgtacttcaacacgatgctgcgcatactggccacgcgc
tgcatgatgcaagccgtctacttcatcagcggcaccgtgcagcgggacgagttcttccac
tacggtttggccgccccgatttacacccactttacgtctccgattcgccggtacgccgac
atcatcgtgcaccggctgctggcggcctgcatcggggccgattccacctacccggagctg
ctggacaagaaggtcaactcgaacctgtgcaacaatctgaactaccgcaaccggatggca
cagtacgcgggccgcgcctcggtcgcactgcacacgcatctgttcttccgcaagcgctcg
gaggacgagcaggcgtacatactgttcatccgcaagaacgcgcttcagatactggtgccg
aagtacgggttcgagggtacgatttacgtgacggggcgcaacaacgaggagatcaaaacg
ggcgtccggttcgtgtacgacgaggagcagcagacgcagcgctgcggccaggttgtgttc
cgcgcgttcgatccggtgatcgtgcggctcagcctcgactcgacgaacgtgcagcacgaa
aagctcgtgttcgagctggtgaaaccgtacatcgaagggttcagcgtgaaggcgcaagat
gcggccgcggaagtggaaacgccgaagcgcaaaggcgagccgcagcagactacgaagtcg
aagaaaaacaagaaggcaaagtaa
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