KEGG   Anopheles arabiensis: 120905677
Entry
120905677         CDS       T07381                                 
Name
(RefSeq) symplekin
  KO
K06100  symplekin
Organism
aara  Anopheles arabiensis
Pathway
aara03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aara00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    120905677
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aara03021]
    120905677
   03019 Messenger RNA biogenesis [BR:aara03019]
    120905677
Transcription machinery [BR:aara03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     120905677
Messenger RNA biogenesis [BR:aara03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     120905677
    U7-dependent histone pre-mRNA processing factors
     120905677
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N HEAT DUF5384
Other DBs
NCBI-GeneID: 120905677
NCBI-ProteinID: XP_040172617
UniProt: A0A182HSH7
LinkDB
Position
2:21199669..21203798
AA seq 1190 aa
MENLLRGSSSFSEAAMLFTDEKIASARTKIVEALNEAQLATTGQKCEIIAKVQELLLHTD
VELLNEFLENMLVLAHDPVAEVRKAIAGFIDEICKQHIAMLPKVVGPMFSLLRDSAPVVT
KRVIQGCGSIYRLAIQWICQLDDIPEEVEQAWNTLCLMKISILDMIDHDNDGIRTNAIKF
LEGVVILQTYPDEDSQKRENDFSLEDVPLTMKQIRRRKLEDEATNIFELLLQFHGASHIS
SVNLIACTGTLCTIAKLRPSTMTRVVEALKHLHSNLPPTLTNSQVSSVRKNLKMQFLNLL
KHPASFEHQATIAQILVDLGASNGEITRAIPKLDKREQQRRAKRALENSMASQLAAKRAK
VDGQARKERDDGGTVGESPRDQPRTMEIDYEELNEQKSRSTKQNEQFLLEVLPKTDLVVQ
LVLSNMDKLTEQMLQSAKPAAVLTVEQYIQKIAQTLAAQMSEVKAGPGASAFTKDPPMKV
RISDEEEKSIILSGKRKPVDPSATPLPPSIGEEDLPEGGAGLPEEDEDDEAMSEEDRQKL
EATRKLRETLERVKGGTVTGEPKLRQRIKMLKLQEITKPLPKATKETFLLDAVVRILKAE
RQALVGGVSMQRNRIITAFGASFINPVRDVIMEHILEDLPKRIELAFSWIFEEYGLMQGF
TRYTHVKHDNGPQYPYTQLLVRLVTNVIERPKDTFRQKESLLKRLYLEAPMLPQELIDML
VRMCELEELVDCGMQIVKDLLIRRPPREKQYLDILLKYAYYENGTIREKAIEYVMSVFAV
HRIMTEDIEKKALVWLAHLENELPPESMFAAEYGRAEHPRTWTEELAKVCLGLFLEVMVY
DQTLLMRFSEVYIKATSEMKRAVIRAIEGPIRKIGSESEELLRLIEQCPKGSETIIIRII
YILTEKSLPSPDLVERVRTLHQTKVSDVRLLIPVINGLTKKEILSALPKLIKLNPGVVKE
VFNRLLGIGVEYGPAELPLTSVELLVALHTIETSKVELKFIVKATSLCLAEKEVYTHDVL
GSVLQQLVEITPLPTLLMRTVIQSLTLHPRLAGFVTNLLQRLILKQVWKQKVVWDGFIKC
AQRLTPQSLGVLIQLPAQQLQDAITICPEFREPMLEHAREIMEHQIGHVSQQVMDVLLGI
SPYSTTESADLQIVGNYSEEAPMSSHMPVKIKQEKDVEPPAAPTPPQSKE
NT seq 3573 nt   +upstreamnt  +downstreamnt
atggagaacctactgcgagggtcgtccagcttcagcgaggctgcgatgctatttaccgac
gaaaagattgccagtgctagaaccaagatcgtcgaagccctgaacgaggcgcagctggca
acgaccggccagaagtgtgaaatcattgccaaagtacaggagctgctcctacacaccgat
gtggaactgttgaacgagtttctggaaaacatgctggtgctcgcgcacgacccggtggcc
gaagtgcggaaagcgatcgccggttttatagacgaaatctgcaagcagcacatcgcgatg
ctgccgaaggtggtgggcccaatgttttcgctgctgcgcgactcggccccggtcgtgacg
aagcgcgtgatacaaggctgcggttcgatctaccggctggcgatccagtggatctgccag
ctggacgatataccggaggaggtcgagcaggcctggaacacgctctgtctgatgaagatt
tccatcctggacatgatcgaccacgacaacgacggcatacggaccaatgcgatcaaattc
ctagagggtgtcgtcatcctgcagacctacccggacgaggatagccagaagcgcgaaaac
gacttctcgctcgaggacgtaccgctcacgatgaagcagatccgccgccggaagctggag
gacgaagcgaccaacatcttcgagctgttgctacagtttcacggtgcgtcccacatttcc
tcggtgaatctgatcgcctgtaccggcacgctgtgcacgattgcaaagctacgcccatcc
acgatgacgcgcgtggtcgaggcgctgaaacatctgcactccaacctgccaccaacgctc
accaactcgcaggtcagctcggtacggaagaacctgaagatgcagtttctgaatctgctc
aagcatccggccagcttcgagcaccaggcaacgattgcgcagatactggtcgatctcggt
gcgtcgaacggtgagattacgcgtgccattccgaagctggacaaacgggagcagcagcgg
cgggcgaaacgtgcactcgaaaactcgatggcatcgcagctcgcggccaagcgtgccaag
gtggacgggcaggcgcgaaaggaaagggatgacggcgggacggtgggtgagtcgccgcgc
gatcagccgcgcacaatggagatcgattatgaggagctgaacgagcagaagagtcgctcc
accaagcagaacgaacagtttctgctcgaggtgctgccaaagacggacctcgtcgtccag
ctggtcctctcgaacatggacaagctgaccgaacagatgctgcagagtgcgaaacccgcc
gccgtgctgacggtcgaacagtacatccagaagatcgcccaaacgctggccgcccagatg
agcgaagtgaaggccggccccggtgcgagcgccttcacgaaagatcccccgatgaaggtg
cgcatcagcgacgaggaggagaaaagtattatcctctccggcaaacggaagccggtcgat
ccgtcggcaacgccacttcctccctcgattggcgaggaagatctgccggagggcggtgcc
ggcctgccggaggaggacgaagacgacgaggcaatgtcggaggaggaccgccaaaaactg
gaagcgacccgcaagctgcgcgaaacgctcgaacgcgtcaagggcggtacggtgacgggc
gagccgaagctgaggcagcgcatcaagatgctgaagctgcaggaaatcacgaaaccgctg
ccgaaagcgaccaaggaaacgttcctgctcgatgcggtcgtgcggatactgaaggcggaa
cggcaggccctggtcggtggggtgagcatgcagcggaatcgtatcatcaccgcgttcggt
gcgtccttcatcaacccggtgcgggacgtgatcatggagcacatactggaggatctgccg
aagcgcatcgagctggcgttttcctggatcttcgaagagtacgggctgatgcaggggttc
acgcgctacacgcacgtcaagcacgacaatgggccgcagtatccgtacacgcagctgctg
gtgcgcctcgtcacgaacgtgatcgagcggccgaaggatacgttccgccagaaggaatct
ctgctcaagcggctctacctggaggcgccgatgctgccccaggagctgatcgatatgctc
gtgcggatgtgcgagctggaggagctggtcgattgtggcatgcagatcgtgaaggatttg
ctgatccgccggccaccgagggagaagcagtatttggacatactgctcaagtacgcgtac
tacgagaatggtacgatccgggagaaagcgatcgagtacgtgatgagcgtgtttgccgtg
catcgcatcatgacggaggacatcgagaagaaggccctcgtctggttggcccatctggag
aacgagctgccgccggagtcgatgtttgcggcggagtacggccgggcggaacatccgcgc
acgtggacggaggagctggcgaaggtttgcctgggcctgtttctcgaggtgatggtgtac
gatcagacgctgctcatgcgcttctcggaggtgtacattaaggcgacgtcggagatgaag
cgcgccgtgatacgggcgatcgagggcccgatccggaagattggctcggaaagcgaggag
ctgctgcggctgatcgaacagtgcccgaagggctcggaaacgatcatcatacgcatcatc
tacatcctcacggagaaatcccttccttcgccggatcttgtggagcgtgtgcgcaccctg
caccaaacgaaggtatccgacgtgcgattgctcatccccgtcatcaatgggctgacgaag
aaggagatcctttcggcactgcccaaactgatcaaactgaacccgggcgtcgtgaaggag
gtgttcaatcggctcctgggcatcggcgtcgagtacgggccggccgagctgccgctcacc
tcggtcgagctgctcgtcgccctgcacacgatcgagacgagcaaggtggagctgaagttt
atcgtgaaagcaacctccctgtgcctggccgagaaggaagtgtacacgcacgatgtgttg
gggagtgtgctgcagcagctggtcgagattacgccgctaccaacgctactgatgcgcacg
gtgatccagtcgctaacgcttcacccgcggctggccggcttcgtcacgaacctgctgcag
cggctcatcctcaagcaggtgtggaagcagaaggtggtgtgggatggtttcatcaagtgc
gcccagcgcctgacgccccaaagcctcggtgtgctgatacagctgccggcgcagcagctg
caggacgcgatcaccatctgtcccgagttccgcgagccgatgctggagcatgcgcgcgaa
atcatggagcaccagattgggcacgtgtcgcagcaggtgatggacgtgctgctcggcatc
tcgccctactcgacgacggaatcggccgacctacagattgttggtaactacagcgaagag
gcgccaatgtcctcccacatgccggtgaaaattaagcaggaaaaggatgtggaaccccct
gccgctccaacaccgccgcaaagcaaggagtag

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