KEGG   Anopheles arabiensis: 120906114
Entry
120906114         CDS       T07381                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
aara  Anopheles arabiensis
Pathway
aara03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aara00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120906114
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aara03041]
    120906114
   03036 Chromosome and associated proteins [BR:aara03036]
    120906114
Spliceosome [BR:aara03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120906114
 Complex B
    120906114
 Complex C
   U2 SnRNP specific factors
    120906114
Chromosome and associated proteins [BR:aara03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    120906114
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG Condensin2nSMC CEP104-like_TOG DUF1428 DUF2298 Bac_thur_toxin UNC45-central
Other DBs
NCBI-GeneID: 120906114
NCBI-ProteinID: XP_040173501
LinkDB
Position
X:15314801..15319667
AA seq 1320 aa
MENIARTHEDIESHIRDLQAKKKELNAEAAKDKGVGLADRGYFDIDLYDGGDTNSKYEGY
VTSIAPNDDIDDEEDEGLPIGRNNRPMGYTAPAALLNEMGQGEDYDPFAERRKPTVAEKE
DEYRQKRRRLVISPERVDPFADGGKTPDVGSRSYTEIMREQMLKGEEAELRKKIQEKAKD
GSLKINSTAQAAKPAPVEAKKRGRWDQAVDEQFVAPKKLAVPATPSWDAEKTPADHRWDE
TPGHKGSETPGATPNVRIWDATPAHVSGAATTPGRETPAEKSTRRNRWDETPKTERETPG
HSWAETPRADRVSGDGVLLEGTTPASKRRSRWDETPSNATPSAMTPSIAMTPTPHGTTTP
GHATPLLTPGGTTPIGHKAMAMATPTPGHLASMTPEQLQAYRWEKEIDERNRPFTDEELD
VMFPPGYKILPPPAGYIPIRTPARKLTATPTPIAGTPAAFFIQTEDKSAKFVDNQPKGNL
PFMKPEDAQYFDKLLVEVDEDALSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKSR
EFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLID
EDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSL
LPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLVEIIEHGLVDEQQKVRTI
TALALAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANY
YTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEAQYIKEEILPHFFKHFWNHRMA
LDRRNYRQLVDTTVEIANKVGASEIVNRVVDDLKDENEQYRKMVMETIEKIMANLGAADI
DSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLSKRVKPYLPQICGTILWRLNNKS
AKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVI
GMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLE
LLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCR
PFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVCPLLEDALMDRDLVH
RQTACAAIKHMALGVYGFGCEDALIHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPI
KILQYTLQGLFHPARKVRDVYWKIYNSLYIGAQDALIVGYPRITNDPKNQYIRYELEYNL
NT seq 3963 nt   +upstreamnt  +downstreamnt
atggaaaacatagcacgtactcacgaggacatcgagtctcacatccgggacttgcaggcc
aagaagaaggagctgaacgccgaagcggcaaaggataagggggtaggtttggccgacaga
gggtacttcgacattgatctttacgatggcggtgataccaacagcaaatacgaaggatac
gtcacatcgatcgcgccaaacgacgacatcgacgatgaggaggacgagggcttgcccatc
gggcggaacaaccgacccatgggttacacggcaccggcggcactgctcaacgagatgggc
cagggcgaggactacgatccgtttgccgagcgacgtaaaccgacggtggcggaaaaggag
gatgagtacagacaaaagcgaagacggctggtcatttcaccggagcgtgtcgatccgttt
gcagatggaggcaaaacgccggatgtgggctcgcgatcgtacacggagattatgcgcgaa
cagatgctgaagggcgaggaagcagagcttcgtaagaaaatccaggaaaaggcgaaggat
ggctcgctgaaaatcaattcgaccgcgcaggccgcgaaaccggcaccggtcgaggcgaag
aagcgtggccgctgggatcaagcagtcgacgagcagtttgtagcgccgaagaagctcgcc
gtgccagcgaccccatcgtgggatgccgagaaaacgccagccgaccaccggtgggacgaa
acgcccggacacaagggcagtgagacgcccggcgccacaccgaacgtgcgcatctgggac
gcaacaccggctcacgtgtccggtgcggcgaccacgcccggtcgggaaacgcccgccgaa
aagtcgaccaggcggaatcgctgggacgagacgccgaaaaccgagcgcgaaacgccgggc
cactcgtgggccgaaactccccgggccgatcgcgtgtcgggcgacggcgtgctgctcgag
ggcacgacgcccgcctccaagcgacggtcgcgctgggatgaaaccccctcgaatgccacc
ccgtcggcaatgacgccgtcgattgcgatgacgccgacaccgcacggcacgacgacgccg
ggtcacgcgaccccgctgctcacgcccggcggcacgacgcccatcgggcacaaggcgatg
gcgatggctacgccgacgccgggccatctcgcgtccatgacgcccgagcagctgcaggcg
taccggtgggagaaggagatcgacgagcgcaaccggccgttcaccgacgaggagctggac
gtgatgttcccgcccgggtacaagattctgcccccgccggccggctacatcccgatccgg
acgccggcccgcaagctgaccgctacgccgacgccgatcgccggcacaccggccgccttc
ttcatccagaccgaggacaaatcggccaagttcgtggacaaccagcccaagggcaacctg
ccgttcatgaagccggaggacgcgcagtacttcgacaagctgctggtggaggtggacgag
gacgccctcagcccggaggagcagaaggagcgcaagatcatgaagctgctgctgaagatc
aagaacggcacgccgcctatgcgcaaggcggccttgcgccagatcaccgacaagtcgcgc
gagttcggcgcgggcccgctgttcaaccagatcctgccgctgctgatgagccccacgctc
gaggaccaggagcgccatctgctggtgaaggtgatcgaccgcatcctgtacaagctggac
gatctggtgcgcccgtacgtgcacaagatactggtcgtgatcgagccgctgctgatcgac
gaggactactatgcgcgcgtggaggggcgcgagatcatctcgaacctggcgaaggcggcc
gggctggccacgatgatctcgacgatgcgcccggacatcgacaacatcgacgagtacgtg
cgcaacacgaccgcgcgcgcgttcgccgtcgtcgcatccgcgctgggcatcccgtcgctg
ctgcccttcctgaaggcggtgtgcaagagcaagaagtcgtggcaggcgcgccacaccggc
atcaagatcgtgcagcagatcgcgatcctgatgggctgcgccatcctgccccacctcaag
tcgctggtcgagatcatcgagcacgggctggtggacgagcagcagaaggtgcgcacgatc
acggccctggcgctggcggcgctggccgaggcggccacgccgtacggcatcgaatcgttc
gactcggtgctgaagccgctgtggaagggcattcggacgcaccgcggcaaggggctggcc
gcgttcctgaaggccatcggctacctgatcccgctgatggacgccgagtacgcgaactac
tacacgcgcgaggtgatgctgatcctgatccgcgagttccagtcgccggacgaggagatg
aagaagatcgtgctgaaggtggtgaagcagtgctgcgcgacggacggcgtggaggcgcag
tacatcaaggaggagatcctgccgcacttcttcaagcacttctggaaccaccggatggcg
ctcgaccggcgcaactaccggcagctggtcgacacgacggtcgagatcgcgaacaaggtc
ggcgcgtccgagatcgtgaaccgcgtggtcgacgacctcaaggacgagaacgagcagtac
cgcaagatggtgatggagacgatcgagaagataatggcgaacctgggcgcggccgacatc
gactcgcgcctggaggagcagctgatcgacggcatactgtacgcgttccaggagcagacg
accgaggacgtggtgatgctgaacgggttcggcacgatcgtgaaccagctgagcaagcgc
gtcaagccgtacctgccgcagatctgcggcaccatcctgtggcggctgaacaacaagtcg
gccaaggtgcggcagcaggcggccgacctgatctcgcgcatcgccgtcgtgatgaagacg
tgccaggaggagaagctgatgggccatctcggcgtggtgctgtacgagtacctcggcgag
gagtacccggaggtgctcggctcgatactgggcgcgctgaaggcgatcgtgaacgtgatc
ggcatgacgaagatgacgcccccgatcaaggatctgctgccgcggctgacgcccatcctg
aagaaccggcacgagaaggtgcaggagaactgcatcgatctggtcgggcgcatcgcggac
cgcggccccgagtacgtgtccgcgcgcgagtggatgcgcatctgcttcgagctgctcgag
ctgctgaaggcccacaagaaggcgatccggcgcgcgacggtcaacacgttcgggtacatc
gcgaaggcgatcgggccgcacgacgtgctggcgacgctgctcaacaatctgaaggtgcag
gagcgccagaaccgcgtctgcaccacggtcgccattgcgatcgtggcggaaacgtgccgc
ccgttcaccgtgctgcccgcgctcatgaacgagtaccgcgtgccggagctgaacgtgcag
aacggcgtgctcaagtcgctctccttcctgttcgagtacatcggcgagatgggcaaggac
tacatctacgccgtctgcccgctgctggaggacgcgctgatggatcgcgacctcgtccac
cggcagacggcctgcgccgcgatcaagcacatggcgctcggcgtgtacgggttcgggtgc
gaggacgcgctcatccatctgctgaactacgtctggccgaacatcttcgagacgtcgccc
catctggtgcaggcgttcatggacgcggtcgaggggctgcgggtggcgctcggcccgatc
aagatactgcagtacacgctgcagggcctgttccatcccgcccgcaaggtgcgcgacgtc
tactggaagatctacaactcgctgtacatcggcgcccaggacgcgctgatcgtcggctac
ccgcgcatcaccaacgatcccaagaaccagtacattcggtacgagctggagtacaacctc
taa

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