Agromyces archimandritae: G127AT_01125
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Entry
G127AT_01125 CDS
T08034
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aarc
Agromyces archimandritae
Pathway
aarc03030
DNA replication
aarc03430
Mismatch repair
aarc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aarc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G127AT_01125 (dnaE)
03430 Mismatch repair
G127AT_01125 (dnaE)
03440 Homologous recombination
G127AT_01125 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aarc03032
]
G127AT_01125 (dnaE)
03400 DNA repair and recombination proteins [BR:
aarc03400
]
G127AT_01125 (dnaE)
Enzymes [BR:
aarc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G127AT_01125 (dnaE)
DNA replication proteins [BR:
aarc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G127AT_01125 (dnaE)
DNA repair and recombination proteins [BR:
aarc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G127AT_01125 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
CcmE
Motif
Other DBs
NCBI-ProteinID:
QTX04897
UniProt:
A0A975INS8
LinkDB
All DBs
Position
complement(228909..232424)
Genome browser
AA seq
1171 aa
AA seq
DB search
MSGDSFVHLHVHSEYSMLDGAARIGELVQAAKGEGMPAVAVTDHGNVFGAFDFWKQATDQ
GVKPIIGTEAYLTPRTHRSDKTRVRWGNGGGDDVSGSGAYTHMTLLAETTEGMHNLFRLS
SLASIEGYYFKPRMDREILQTYAKGLIATTGCPSGEVQTRLRLGQYDEAVKAAAEFRDIF
GAENFFCEIMDHGLGIEKRIMTDLLRLAEELSLPLVATNDLHYTHAADAKSHAALLCVQS
GSTLDDPNRFKFDSEDFYLKSAEEMRHLFRDHPDACDNTLAIAERCNVEFNTKANYMPRY
PVPAGENEESWFVKEVEKGLHLRYPEGIPQRVREQADYEVGVISQMGFPGYFLVVSDFIN
WSKENGIRVGPGRGSGAGSMAAYAMKITDLDPLEHGLIFERFLNPDRVSMPDFDVDFDER
RRGEVIKYVTAKYGAERVAQIVTYGTIKAKQALKDSSRVLGFPFGMGEKLTKAMPQAVMG
KDIPLSGIFDKDHPRYKEAGDIRAVIETDPEARTVFETATGLENLKRQWGVHAAGVIMSS
EPLIDIIPIMKREQDGQIVTQFDYPACESLGLIKMDFLGLRNLTIIDDALDNIELNRGFR
PVLEDLALDDADAYRLLGSGETLGVFQLDGGPMRGLLRQMKPDNFEDISAVIALYRPGPM
GANSHINYALRKNGLQEITPIHPEFTESLADILDTTYGLIIYQEQVMAIAQRVAGFSLGQ
ADILRRAMGKKKKSELDKQYAGFEAGMKANGYSDAAIKTLWDILLPFSDYAFNKAHSAAY
GVLSYWTAYLKAHYPAEYMAALLTSVGDARDKLALYLNECRRMGITVLAPDVNESIGFFS
AVGDDIRFGLGAVRNVGFNVVEAIRGAREEKGRFEHFHDFLKKVPIQVANKRTVESLVKA
GAFDSLGHTRRSLVEIHEGAVESAVSEKRVEATGQAGFDFDSLFAEDAQEPVSAVPDRPE
WSKKDKLAFEREMLGLYVSDHPLAGLEVPLAKHASTSITELLSSESTQDGDTVTIAGLVT
SVQHRVARQSGNQYGMIQVEDFAGEITVMFMGKAYQEFAPTLQADSIVVVRGRVSMRDDG
MNLHAFSVFQPELGQGDDHGPVMISMPEQRATTDTVTALGDVLTRHVGDTEVRLKLVRGG
IARVFELPYPVRVTADFYGELKSLLGPNCLT
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
gtgtccggcgattccttcgtccatctgcacgtccacagcgagtactcgatgctcgacggc
gcggcccggatcggggagctcgtccaggccgccaagggcgaggggatgccggcggtcgcc
gtcacggaccacggcaacgtcttcggggcgttcgacttctggaagcaggcgaccgaccag
ggcgtgaagcccatcatcggcaccgaggcgtacctgacgccccgcacccaccgcagcgac
aagacccgggtgcgctggggcaacggcggcggcgacgacgtctcggggtccggcgcgtac
acgcatatgaccctgctggccgagacgaccgagggtatgcacaacctgttccgcctctcg
agcctcgcctcgatcgagggctactacttcaagccgcgcatggaccgcgagatcctgcag
acgtacgccaaagggctcatcgcgacgaccggatgcccctccggcgaggtgcagacgcgc
ctacggctcggtcagtacgacgaggccgtgaaggcggccgctgagttccgcgacatcttc
ggcgccgagaacttcttctgcgagatcatggaccacgggctcgggatcgagaagcggatc
atgacggatctgctgcgcctggccgaggagctctcgctcccgctcgtcgcgacgaacgac
ctgcactacacgcatgcggccgatgccaagagccacgccgcgctgctctgcgtgcagtcc
ggctccaccctcgacgatccgaaccgcttcaagttcgactccgaggacttctacctgaag
tcggccgaggagatgcgccacctcttccgcgaccaccccgacgcctgcgacaacacgctc
gcgatcgccgagcgctgcaacgtcgagttcaacaccaaggcgaactacatgccgcgctac
ccggtgcccgccggggagaacgaggagagctggttcgtcaaggaggtcgagaaagggctg
cacctgcgctaccccgaggggatcccgcagcgcgtgcgcgagcaggccgactacgaggtc
ggcgtcatcagccagatgggcttcccgggatacttcctcgtcgtctccgacttcatcaac
tggtcgaaggagaacggcatccgggtcggcccgggccgcggctcgggcgccgggtcgatg
gcggcgtacgccatgaagatcaccgacctcgacccgctcgagcacgggctcatcttcgag
cgcttcctgaaccccgaccgcgtctcgatgcccgacttcgacgtggacttcgacgaacgt
cgtcggggcgaggtcatcaagtacgtgaccgccaagtacggcgccgagcgcgtcgcccag
atcgtcacctacggcacgatcaaggccaagcaggccctcaaggactcgagccgcgtgctc
ggcttcccgttcgggatgggcgagaagctcacgaaggcgatgccgcaggccgtcatgggc
aaggacatcccgctctcgggaatcttcgacaaggaccacccgcgctacaaagaggccggg
gacatccgcgcggtcatcgagaccgaccccgaggcgcgcaccgtcttcgagacggcgacg
gggctggagaacctgaagcggcagtggggcgtgcacgcggccggcgtcatcatgtcgagc
gagccgctcatcgacatcatcccgatcatgaagcgggagcaggacgggcagatcgtcacg
cagttcgactacccggcgtgcgaatcgctcgggctcatcaagatggacttcctggggctg
cgcaacctcaccatcatcgacgacgccctcgacaacatcgaattgaaccggggcttccga
cccgtgctcgaagacctcgccctcgacgacgccgacgcctaccgcctgctcggctcgggc
gagacgctcggcgtgttccagctcgacggcgggccgatgcgcgggctgctccggcagatg
aagcccgacaacttcgaggacatctcggccgtcatcgccctgtaccgccccggcccgatg
ggcgccaactcgcatatcaactacgcgctccgcaagaacggcctgcaggagatcacgccg
atccacccggagttcaccgagtcgctcgccgacatcctcgacaccacctacggcctcatc
atctaccaggagcaggtgatggccatcgcccagcgcgtcgccggcttctcgctcggccag
gcggacatcctccgccgcgcgatgggcaagaagaagaagtcggagctcgacaagcagtac
gccggcttcgaagccggtatgaaggccaacggctactccgatgcggcgatcaagaccctg
tgggacatcctgctgcccttctccgactacgccttcaacaaggcccactcggccgcgtac
ggggtgctgagctactggacggcctatctgaaggcgcactacccggccgagtacatggcc
gccctgctcacgagcgtcggcgacgcccgcgacaagctcgcgctgtacctgaacgagtgc
cgccgtatgggcatcacggtgctcgcgcccgatgtgaacgagtcgatcggcttcttctcg
gccgtcggcgacgacatccgcttcggcctcggcgcggtgcgcaacgtcggcttcaacgtc
gtcgaggccatccgcggcgcccgcgaggagaagggccgcttcgagcacttccacgacttc
ctgaagaaggtgccgatccaggtcgccaacaagcgcaccgtcgaatcgctcgtgaaggcc
ggtgccttcgattcgctcggccatacccggcgctcgctcgtcgagatccacgagggcgcc
gtcgaatcggccgtctcggagaagcgcgtcgaggcgaccggtcaggccggcttcgacttc
gacagcctcttcgccgaggacgcgcaggagcccgtgtcggcggtgccggatcgcccggaa
tggtcgaagaaggacaagctcgccttcgaacgcgagatgctcgggctctacgtctccgac
catccgctcgccggcctcgaggttccgctcgccaagcacgcctcgacctccatcaccgag
ctcctctcatccgagtcgacccaggacggcgacacggtcaccatcgccgggctcgtcacg
agcgtgcagcaccgcgtcgccagacagtcgggcaaccagtacggcatgatccaggtcgag
gacttcgccggcgagatcaccgtgatgttcatgggcaaggcgtaccaggaattcgccccg
accctgcaggccgactcgatcgtcgtcgtgcgcggccgcgtcagcatgcgcgacgacggc
atgaacctgcacgcgttcagcgtcttccagcccgagctcggccagggcgacgatcacggt
ccggtgatgatcagcatgcccgagcaacgggcgacgaccgacaccgtcaccgcgctcggc
gatgtgctgacgcgccacgtcggcgacaccgaggtgcgcctgaaactcgtgcgcggcggc
atcgcccgcgtcttcgaactgccgtacccggtgcgcgtgacggccgacttctacggggag
ctgaagagcctgctcgggcccaactgcctcacctga
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