Agromyces archimandritae: G127AT_05125
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Entry
G127AT_05125 CDS
T08034
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aarc
Agromyces archimandritae
Pathway
aarc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aarc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G127AT_05125 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aarc03019
]
G127AT_05125 (recQ)
03400 DNA repair and recombination proteins [BR:
aarc03400
]
G127AT_05125 (recQ)
Enzymes [BR:
aarc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G127AT_05125 (recQ)
Messenger RNA biogenesis [BR:
aarc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G127AT_05125 (recQ)
DNA repair and recombination proteins [BR:
aarc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G127AT_05125 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QTX06168
UniProt:
A0A975FPE6
LinkDB
All DBs
Position
complement(1124751..1126769)
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AA seq
672 aa
AA seq
DB search
MPEPWDPDAFAPPEDEFAPPPDDWDAPPPPDDRFDTVAAGPGGGPGAGGAASAAGGRSPG
RAAPARFGTALEALHTVFGYESFRGEQAEIIAQLAGGGDAVVLMPTGGGKSLCYQIPALL
REGTGVVVSPLIALMHDQVEALTRNGVRAAYLNSSQHPGDRAEVERAFLAGELDLLYIAP
ERLNTEGAKSLLSRGRVALFAIDEAHCVSQWGHDFRPDYLALGELAERWPDVPRIALTAT
ATEATHREITERLALGDARHFVASFDRPNIQYRIAPKAEVRKQLLDFVRSEGRDADGNPV
SGIVYALSRASTEKFAGYLAQHGVDAMPYHAGLDAETRRRTQDRFLREDGVVIVATIAFG
MGIDKPDVRFVAHVDLPKSVEGYYQETGRAGRDGAPATAWLAYGLQDVVQQRRMIDQSPG
DLAYRRRLQSHLDTMLALCETVSCRRQNLLAYFGQRSEPCGNCDTCLEPPASWDGTIPAQ
KLLSTVVRLQRERGQRFGAGHLIDILRGKRTARVEQYGHDALSTWSIGGDLSDSQWRSVV
RQLLAQGLLQAKGEYGVLEITPDATPVLAGERQVSLRTEPERQVRSERRKAPAAVDLEPA
QLELFEALRAWRAGEAREQGVPAYIVFGDATLRAVAVAKPASLAELDGITGIGAKKLEAY
GQALVDTVAGHA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
ctgcccgagccctgggacccggatgcgttcgcgcccccggaggacgagttcgcgccgccg
cccgacgactgggacgcgccgcccccgcccgacgaccggttcgacacggtcgccgcaggg
ccgggcggcggtccgggggccggcggcgcggcatccgctgcgggaggccgaagcccgggc
cgggcggcccccgcccgcttcggcaccgccctcgaggcgctgcacacggtcttcgggtac
gagtcgttccgcggcgagcaggccgagatcatcgctcagctggccggtggcggcgacgcc
gtcgtgctcatgccgacgggcggcggcaagagcctctgctaccagatcccggcgctgctg
cgcgagggcacgggcgtcgtcgtgtcgcccctcatcgcgctcatgcacgatcaggtcgag
gcgctcacgcgcaacggcgtgcgcgccgcgtacctgaactcgagccagcacccgggcgat
cgagccgaggtcgagcgggcgttcctcgcgggcgagctggatctgctctacatcgcgccc
gagcgactgaacaccgagggggcgaagtcgctgctgtcgcgggggcgcgtcgcgctgttc
gcgatcgacgaggcgcactgcgtgtcgcagtggggccacgatttccggcccgactacctc
gcgctcggcgagctcgccgaacgctggccggacgtgccgcgcatcgcgctgacggcgacg
gcgacggaggcgacgcaccgcgagatcaccgagcggctcgccctcggcgacgcgaggcat
ttcgtggcgagcttcgaccggccgaacatccagtaccgcatcgcgccgaaggcggaggtg
cgcaagcagctgctcgatttcgtgcgcagcgaggggcgcgacgccgacggcaacccggtt
tcgggcatcgtctacgcgctctcgcgggcgagcacggagaagttcgcgggctacctcgcc
cagcacggcgtcgatgcgatgccgtaccacgcgggcctcgacgccgagacgaggcgccgc
acacaggatcgcttcctccgcgaggacggcgtcgtgatcgtcgcgacgatcgcgttcggc
atgggcatcgacaaacccgatgtgcgcttcgtcgcgcatgtggatctgccgaagtcggtc
gagggctactaccaggagacgggtcgcgccggccgcgacggtgcgccggcgacggcatgg
ctggcctacgggctgcaggacgtcgtccagcagcgccgcatgatcgaccagagcccgggc
gacctcgcgtaccggcgccgtctgcagtcgcatctcgatacgatgctcgccctgtgcgag
acggtgagctgccgcaggcagaacctgctggcctatttcggtcagcgttccgaaccgtgc
ggcaactgcgacacctgcctcgagccgcccgcgtcgtgggacggcacgatccccgcgcag
aagctcctgtcgaccgtcgtgcgcctgcagcgcgagcgcgggcagcggttcggcgccggc
cacctcatcgacatcctccgcggcaagcgcacggcgcgcgtcgagcagtacgggcacgat
gccctgtcgacgtggtcgatcggcggcgacctgtcggattcgcagtggcgcagcgtcgtc
cggcagctcctcgcgcaggggctgctgcaggcgaagggcgagtacggcgtgctggagatc
acgcccgatgcgacgcccgtgctcgccggcgaacggcaggtgtcgctgcgcaccgagccc
gagcggcaggtccggtccgagcggcgcaaggcgccggccgcggtggatctcgaacccgct
cagctggagctcttcgaagcgctgcgcgcctggcgggccggcgaggcgcgcgaacagggc
gtgccggcgtacatcgtcttcggggatgcgacgctgcgcgcggtcgccgtcgcgaagccg
gcgagcctcgccgaactcgacggcatcaccggcatcggtgcgaagaagctcgaggcctac
ggccaggcgctcgtcgacacggtcgccgggcacgcctga
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