Agromyces archimandritae: G127AT_11900
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Entry
G127AT_11900 CDS
T08034
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
aarc
Agromyces archimandritae
Pathway
aarc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aarc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
G127AT_11900
09124 Replication and repair
03420 Nucleotide excision repair
G127AT_11900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aarc03021
]
G127AT_11900
03400 DNA repair and recombination proteins [BR:
aarc03400
]
G127AT_11900
Enzymes [BR:
aarc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G127AT_11900
Transcription machinery [BR:
aarc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
G127AT_11900
DNA repair and recombination proteins [BR:
aarc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
G127AT_11900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QTX04000
UniProt:
A0A975FKY5
LinkDB
All DBs
Position
complement(2611235..2612875)
Genome browser
AA seq
546 aa
AA seq
DB search
MSDGPLIVQSDRTVLLEVAHPLAEDARHDLAVFAELERAPEHIHTYRITRLGLWNARAAG
HSADDMIGTLERYSKFPVPATVSVDMRETVGRYGRLVIDRTDDGALRLRSDDVAVFTEVT
NAKRIAPLLGEPIDAGSRLVAAWARGQLKQELVKLGWPAEDLAGYTPGTPHPIELEEDGW
QLRDYQQHAVDNFFTGGSGVVVLPCGAGKTLVGAGAMATAKTTTLILVTNTVSARQWRDE
LLRRTSLTPEEIGEYSGQLKEIKPVTIATYQILTAKRKGEYAHLSLLDALDWGLIVYDEV
HLLPAPVFKLTAELQARRRLGLTATLVREDGREGDVFSLIGPKRFDAPWKEIEAQGYISP
AACYEVRIDLPQGERLQYAAAPDDERYRLASTAPAKLGVVKRLVERHAGERILVIGQYLD
QIEELAGALGAPQLTGSTPIEERERLYQEFRDGTTPVLVVSKVANFSVDLPEATVAIQVS
GSFGSRQEEAQRLGRLLRPKESGLSANFYTLVSRDTVDQDFAQNRQRFLAEQGYSYTIMD
ADALAA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacggccccctcatcgtccagagcgatcgcaccgtgctgctcgaggtcgcgcat
cccctcgcggaagacgcgcggcacgacctcgcggtcttcgccgaactcgaacgcgcaccc
gagcacatccacacctaccgcatcacgcggctcgggctgtggaacgcgcgcgcggccggg
cacagcgccgacgacatgatcggcacgctcgagcggtactcgaagttcccggtgccggcg
acggtgtcggtcgacatgcgcgaaaccgtcggccgatacgggcggctcgtgatcgaccgc
accgacgacggcgccctccggctccggagcgacgacgtcgccgtgttcaccgaggtcacc
aacgccaaacgcatcgccccgctgctcggcgaaccgatcgacgccggcagccgactcgtg
gcggcgtgggcgcgcgggcagctcaagcaggagctcgtcaagctcggttggccggccgag
gatctcgccggctacacgccgggcaccccgcatccgatcgagctcgaggaggacggctgg
cagctgcgcgactaccagcagcatgccgtcgacaacttcttcacgggcggatccggcgtc
gtcgtgctgccctgcggcgccggcaagaccctcgtgggcgccggtgcgatggccacggcg
aagacgacgacgctcatcctcgtgacgaacacggtcagcgccaggcagtggcgcgacgaa
ctgctgcggcgcacgtcgctgacgccggaggagatcggcgagtattccgggcagctgaag
gagatcaaacccgtcacgatcgcgacgtaccagatcctcaccgccaagcggaagggcgag
tacgcgcacctctccctcctcgacgccctcgactggggcctcatcgtctacgacgaggtg
cacctgctgcccgctcccgtcttcaagctcaccgcagagctccaggcacggcgccgcctc
gggctcaccgcgacgctcgtgcgcgaggacggccgcgagggcgatgtgttcagcctcatc
ggacccaagcgtttcgacgcgccctggaaggagatcgaggcacagggctatatctccccc
gccgcctgctacgaggtgcggatcgacctgccgcagggcgagcgcctgcagtacgccgcg
gcccccgacgacgagcgctaccgcctggcatccaccgcaccggcgaagctcggcgtcgtc
aagcgcctcgtcgaacgccacgcgggcgagcggatcctcgtcatcggccagtacctcgac
cagatcgaagaactcgccggagccctcggcgccccgcagctgaccggctcgacccccatc
gaggagcgcgaacgcctgtatcaggaattccgcgacggcacgacaccggtgctcgtcgtc
tcgaaggtcgcgaacttctcggtcgatctgcccgaggccaccgtcgcgatccaggtttcg
ggttccttcggctcgcggcaggaggaggcccagcgcctcggccgcctgctgcgccccaag
gagtcgggcctctcggcgaacttctacaccctcgtctcgcgcgacaccgtggaccaggac
ttcgcgcagaaccgacagcgcttcctcgccgagcagggctacagctacacgatcatggat
gccgacgccctcgcggcgtga
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