Agromyces archimandritae: G127AT_12150
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Entry
G127AT_12150 CDS
T08034
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
aarc
Agromyces archimandritae
Brite
KEGG Orthology (KO) [BR:
aarc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aarc03019
]
G127AT_12150 (hrpA)
Enzymes [BR:
aarc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
G127AT_12150 (hrpA)
Messenger RNA biogenesis [BR:
aarc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
G127AT_12150 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_19
AAA_22
WHD_HA2
nSTAND_NTPase5
T2SSE
AAA_30
nSTAND3
ResIII
NACHT
UvrD-helicase
SLFN-g3_helicase
AAA_11
AAA_16
Zeta_toxin
PhoH
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QTX04042
UniProt:
A0A975IMY7
LinkDB
All DBs
Position
complement(2656100..2660197)
Genome browser
AA seq
1365 aa
AA seq
DB search
MPSAITYPPELPVSAQRDEIARALEAHQVVVVAGATGSGKTTQLPKICLELGRGSIAHTQ
PRRIAARTIAERIADELGEEVGGLVGYQVRFTDRVSESTRIKVMTDGILLNEIHRDRLLR
RYDTIIIDEAHERSLNIDFLLGYLKRLLPKRPELKLVITSATIDPGSFAEHFADAEGRPA
PVIEVSGRTFPVEIRYRPPAGADDGDEDVDAARPAGARGRGGADRGEDDPTDAVLAALDE
LDREAAGDVLVFCSGEQEIRDAEEAVCGHYAGRSAGYGTTQVLPLYGRLSAADQHRVFEP
GREPGIRRRIVLATNVAETSLTVPGIRYVVDGGTARISRYSTRAKVQRLPIEPISQASAN
QRSGRSGRTSAGIAIRLYAEDDFERRPEFTDPEILRTNLASVILQMASLGLGPVADFPFL
TPPDPRGVRDGLELLAELGALEEGPAADAGPRLTRIGRQLARLPIEPRFGRMVVESRVHG
VTEEVLAIVAGLTVQDPRERPLDKREQADAMHARFVDPTSDFVTLLNLWNHLEEQQRQLG
SSAFRRMCRTEFLNYLRVREWQDLVRQLRRAAKPLGLGAGGERGADAAGRAAGATGADAA
RRAAGATGADAAGRAAGAAADGIHRSLLAGLLSHIGLRDDRAAASTAKNPKTPKGPRARP
EFLGARGTRFAIFPGSALAKKPPQAVMSAELVETSRLFARMNAAIDPAWAEALAGPLAKR
SFSNPRWDEKQGSAVADEKVLLFGLPIVPKRRMRLARADPELARELFIRHALVQEEWDWS
KLDRRVFAFIADNRRTRRELGEIEERTRRRDILAGDEAIVRFYEARVPGQATDARSFERW
WREEYRTRPELLTVTRAELLGEEAGAPDADAFPERWRQGDQEYRLAYRFEPGADDDGVTV
VVPLVLLPRLDPAGFDWQVPGLRDELIQAMLRTLPKVIRRQVVPAAEWAAKIAEELPAGP
EGGAERGPFAAVVAAIVKRLTYAPVTAEDFDASRIPGHLTMTFRAVDARGKTLGSDTDLG
ALQARLAERTREAVARAVGGPDGGRAPGGGRGRGPGGRRGGAASPGDVAAATPTGGLPER
SGITAWEWNELPEHVDRTQAGNTVRAYPALVDDGDAVSLRMLATAAERDRATRRGILRLL
VLATPTPVAYVQEHLSNEEKLTLAASPYPGPRALLDDCLLACIEAELRARHPSGVLRTRA
EFEAVRDAVSAGIVDRMFDVVRTVTSVLREARTAEKAISKASSLALMAALADARSDLEGL
VHRGFIRDTGLERLPRLPRYLQAITARVADLQENPGRDRQRMNEIDEAREAYEQAGGTIP
IDPDADPRLVRVRWMLEELRIGLFAQRLGTAEPVSVQRIRKALAA
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgcgatcacctacccgcccgagctgccggtctccgcgcagcgggacgagatc
gcgcgcgccctcgaagcgcaccaggtcgtcgtcgtcgccggcgccaccggcagcggcaag
acgacgcagctgccgaagatctgcctcgagctcgggcgcggatccatcgcccacacccag
ccccgccgcatcgcggcgcgcacgatcgccgaacgcatcgccgacgagctcggcgaagag
gtcggcgggctcgtcggctatcaggtccgcttcaccgaccgggtgagcgagtcgacgcgc
atcaaggtcatgaccgacggcatcctgctgaacgagatccaccgcgaccggctcctgcgc
cgctacgacacgatcatcatcgacgaggcgcacgaacgcagcctgaacatcgacttcctg
ctcgggtatctgaagcggctgctgccgaagcggccggagctgaagctcgtcatcacgagc
gcgacgatcgacccgggcagcttcgcggagcacttcgcggatgccgaggggcggccggcc
ccggtgatcgaggtctcggggcgcaccttccccgtcgagatccgataccggccgccggcc
ggcgccgacgacggcgacgaggatgtggatgccgcacggccggcgggcgcgcgcgggcgc
ggcggcgcggaccgcggcgaggacgacccgacggatgccgtgctcgccgccctcgacgag
ctcgaccgggaggcggcgggcgacgtgctcgtgttctgctcgggcgagcaggagatccgc
gacgcggaggaggcggtgtgcggccactacgccggccgcagcgccggctacggcacgacg
caggtgctgccgctgtacggccggctctcggccgccgaccagcaccgggtgttcgagccc
ggccgggagcccggcatccgccgccgcatcgtgctcgccacgaacgtcgccgagacgagc
ctgacggtccccggcatccgctacgtcgtcgacggcggcaccgcgcgcatcagccgctat
tcgacgcgggcgaaggtgcagcggctgccgatcgagccgatctcgcaggcctcggcgaac
cagcgatcggggcgttcggggcgcacgagcgcgggcatcgcgatccgcctctacgccgag
gacgacttcgagcggcgccccgagttcaccgaccccgagatcctgcgcacgaacctcgcg
agcgtcatcctgcagatggcctcgctcggcctcgggccggtcgccgacttcccgttcctc
accccgccggacccgcggggcgtgcgcgacggcctcgagctgctcgcggagctcggcgcc
ctcgaggaggggcctgccgccgacgcggggccccgcctcacgcgcatcgggcggcagctc
gcgcgcctgccgatcgagccgcgtttcgggcggatggtcgtcgagtcgcgcgtgcacggc
gtcaccgaggaggtgctcgcgatcgtcgccgggctcacggtgcaggacccgcgcgagcgg
ccgctcgacaagcgcgagcaggccgatgcgatgcacgcccgcttcgtcgacccgacgagc
gacttcgtgacgctgctgaacctctggaaccacctcgaggagcagcagcggcagctcggt
tcgagcgccttccggcggatgtgccgcaccgagttcctgaattacctgcgggtgcgcgag
tggcaggacctcgtgcggcagctgcggcgcgcggcgaagcccctcggcctgggggcgggc
ggcgagcggggtgcggatgccgcggggcgcgcggccggagcgacgggtgcggatgccgcg
aggcgcgcggccggagcgacgggtgcggatgccgcggggcgcgcggccggagcggcggcc
gacggcatccaccgctcgctgctggccggcctgctctcgcacatcggcctgcgggacgac
cgcgccgccgcatccaccgcgaagaacccgaagaccccgaaggggccgcgggccaggcca
gagttcctcggggcccgcggcacgcgcttcgcgatcttcccggggtcggcgcttgcgaag
aaaccgcctcaggcggtcatgagcgccgaactcgtcgaaaccagccggctcttcgcccgc
atgaacgccgcgatcgaccccgcctgggccgaagcgctcgccggcccgctcgccaaacgc
agcttctcgaaccctcgctgggacgagaagcagggctccgccgtcgccgacgagaaagtg
ctgctgttcgggctgccgatcgtaccgaaacggcggatgcggctggcccgggccgacccg
gagctcgcgcgcgagctcttcatccgccacgcgctcgtgcaggaggagtgggactggtcg
aagctcgaccggcgcgtcttcgcgttcatcgccgacaaccgccgcacccgccgcgagctc
ggcgagatcgaggaacgcacccggcgccgcgacatcctcgccggcgacgaggcgatcgtg
cgcttctacgaggcgcgcgtgcccgggcaggcgacggatgcccgcagcttcgaacgctgg
tggcgggaggaataccgcacccggccggagctgctcaccgtcacccgtgccgaactgctc
ggcgaggaggcgggcgccccggacgccgacgcgttccccgagcgctggcggcagggcgat
caggagtaccggctcgcctaccgtttcgagcccggcgccgacgacgacggcgtgaccgtg
gtcgtcccgctcgtgctgctgccgcgcctggaccccgcgggcttcgactggcaggtgccc
ggcctccgcgacgaactcatccaggcgatgctgcgcaccctgccgaaggtcatccgccgc
caggtcgtgcccgccgccgaatgggccgccaagatcgccgaggagctgccggccggcccc
gagggcggggcggaacgcggaccgttcgccgccgtcgtcgccgcgatcgtcaaacggctc
acctatgcgcccgtgacggccgaggacttcgacgcctcgcgcatcccaggtcatctgacg
atgacgttccgcgcggtggatgcccgtggcaagacgctcggaagcgacaccgatctcggc
gccctgcaggcgcgcctggccgagcggacgcgggaggccgtcgcccgcgcggtcggcggg
ccggacggcggccgcgccccgggcggcgggcgcgggcgaggcccgggcggccggcgcggc
ggggcggcatcccccggcgacgtcgcggcggcgaccccgacgggcgggctgccggagcgg
agcggcatcacggcatgggagtggaacgagctgcccgagcacgtcgaccgcacccaggcc
ggcaacacggtacgcgcctacccggcgctcgtcgacgacggcgacgcggtgtcgctccgg
atgctcgccacggccgccgaacgcgaccgtgcgacgcgccgcggcatcctgcgcctgctc
gtgctcgccaccccgacgcccgtcgcctacgtgcaggagcacctctcgaacgaggagaag
ctgacgctcgccgcgagcccctaccccggccctcgagccctgctcgacgactgcctgctc
gcctgcatcgaggccgagctgcgggcccggcacccctccggggtgctccgcacccgcgcc
gagttcgaggccgtgcgcgatgcggtctcggccggcatcgtggatcgcatgttcgacgtg
gtccgcaccgtcacctccgtgctgcgcgaggcgcgcacggccgagaaggcgatctcgaag
gcgtcgagcctcgcgctcatggccgcgctcgcggatgcgcgaagcgacctcgaaggactc
gtccatcgcggcttcatccgcgacacggggctcgaacgcctgccgcggctgccgcgctac
ctgcaggcgatcaccgcgcgcgtcgccgatctgcaggagaaccccgggcgcgaccggcag
cgcatgaacgagatcgacgaggcgcgcgaggcgtacgagcaggccgggggcacgatcccg
atcgacccggacgcggacccgcggctcgtgcgggtgcggtggatgctcgaggagctccgc
atcgggctgttcgcccagcgcctcggcaccgccgaacccgtctcggtgcagcgcatccgc
aaagcgctggcggcctga
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