Agromyces archimandritae: G127AT_13485
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Entry
G127AT_13485 CDS
T08034
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aarc
Agromyces archimandritae
Pathway
aarc03420
Nucleotide excision repair
aarc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aarc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G127AT_13485
03430 Mismatch repair
G127AT_13485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aarc03400
]
G127AT_13485
Enzymes [BR:
aarc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G127AT_13485
DNA repair and recombination proteins [BR:
aarc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G127AT_13485
MMR (mismatch excision repair)
Other MMR factors
G127AT_13485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
HTH_AsnC-type
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QTX04279
UniProt:
A0A975INI4
LinkDB
All DBs
Position
2933969..2937268
Genome browser
AA seq
1099 aa
AA seq
DB search
MNEETGMSEHVRLTAAEIAERLGLHPPTAEQAAVIEADPRGQAIVVAGAGSGKTETMSNR
VVWLLAGGHVAVSEVLGLTFTRKAAGELAERVRLRVGELADAGIGAFADDPLESATIATY
NSFASAIYREHAMLIGREPDASVLGEASAWQLARRVVVASADDRLVELDASVDRLTGAVL
SLSRAIAENVVDPGELRAFAREFCEANAELPHGPRQRVDSKDLAKALGDVAALDPLIDLA
VAYQDAKRVGGYVEFSDQIALALQICTEHPEVVEEYRGRYRAVLLDEYQDTSVVQTRLLA
TLFGGCSVMAVGDPDQSIYGWRGASAANLARFGRDFAGGTAAAFDLSTSWRNPHRVLEAA
NTLIAPLADGAAIAKLPLSASPFAGEGAVETVWRETIEDEAAAVAAWFDGRLAGERTGAV
LCRTFADITVFTDALEARGIPYHVLGVAGLLEQPVIADLVAALRVLHDPSAGAELLRVLG
GARWRIGPADLAELGTLARWLADRDIATRRLGDEVRAKLRASIAVDETPSIVDALDFLIS
APDGHRALAGFSPVALARMRRAGAQLQALRRRAGFALADFVHLVVHELQLDIEVAANPAR
RLGRESLDAFDELVAGFASSAEHATLGAFLGWLLEAEQRDRLSPRGEEPEPGAVQLLSIH
ASKGLEWDVVAIPRMVDGELPGRLRSTKGWIAFGELPYAFKGDAEELPEFVWQGHETQKD
FDAALAAFGVENAERHAEEERRLAYVAVTRARAELLLSGSWWSRQTKPRPPGTFLWELSE
AGLIPPDTLPAAPAEPENPLDASSERLSWPLDPLGRRRDAVEHAARAVRGAAERPSGEGI
GPRLAEHIELLLAERRAREAGEQALTAPTRIPASRFKDYVDDPDAVERALRRPMPERPFR
ATRVGTLFHSWVERRSNGGGELDALDAADALGGADALAAADGLVGAADEERMARLRDTFL
ASPWGHRAPTAVELELHLPLGANVFVCKLDAVYEAPAEAIARGIRYEVVDWKTGRSPADA
RDLELKQTQLALYRLAYANWAGIDPSEIDALFYYVEEDLVIRPERLYDEAELRSAWASVA
ARSGSEGSEAAGASASAPV
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggagacggggatgagcgaacacgtgcggctcacggcggccgagatcgccgaa
cggctgggcctgcacccgccgaccgccgagcaggccgccgtgatcgaggccgatccgcgc
ggccaggcgatcgtcgtcgccggagccggcagcggcaagaccgagaccatgtcgaaccgg
gtcgtctggctgctcgcgggcgggcacgtcgccgtctcggaggtgctcggcctcacgttc
acccgcaaagccgccggcgagctcgccgagcgcgtgcggctccgcgtcggagaactcgcc
gacgccggcatcggcgccttcgcagacgacccgctcgagtcggcgacgatcgcgacctac
aactccttcgcgagcgcgatctaccgcgagcacgcgatgctcatcggccgcgaaccggac
gcatccgtgctcggcgaggcatccgcctggcagctcgcccgccgcgtcgtcgtcgcctcg
gccgacgaccgcctcgtcgaactcgacgcctcggtcgaccggctgaccggcgccgtgctc
tccctcagccgtgcgatcgccgagaacgtcgtcgatcccggcgagctgcgggccttcgcc
cgggaattctgcgaagcgaatgcggagctgccgcacgggccgaggcagcgggtggattcc
aaggacctcgcgaaagcgctcggagacgtcgcggccctcgacccgctcatcgacctcgcc
gtcgcctaccaggacgccaaacgcgtcggcggatacgtcgagttctcggatcagatcgcc
ctcgccctgcagatctgcaccgagcatcccgaggtcgtcgaggagtaccgcggcagatac
cgcgccgtgctcctcgacgaataccaggacacctccgtcgtgcagacgcgcctgctcgcg
accctcttcggcggatgctccgtgatggccgtcggcgaccccgaccagtcgatctacggc
tggcgcggggcgagcgcggccaacctcgcccgattcgggcgcgacttcgccggcggaacc
gccgccgccttcgacctgtcgacgagctggcggaacccgcaccgggtgctggaggccgcc
aacaccctcatcgccccgctcgccgacggggctgcgatcgccaaactgccgctttcggca
tcgccgttcgccggcgaaggcgccgtcgaaaccgtctggcgcgagaccatcgaagacgag
gccgccgccgtcgccgcctggttcgacggccggctcgccggcgaacggacgggcgccgtg
ctctgccgcaccttcgccgacatcacggtcttcaccgatgcgctcgaagcccgcggcatc
ccgtaccacgtgctcggcgtcgccggcctcctcgaacaacccgtcatcgccgacctcgtc
gcggcgctgcgcgtgctgcacgacccctcggccggcgccgaactgctccgcgtgctcggc
ggcgcccgctggcggatcggaccggccgacctcgccgaactcggcacgctcgcccgatgg
ctcgccgatcgcgacatcgccacccggcgcctcggcgacgaggtgcgcgcgaagctccgt
gcgagcatcgccgtcgacgagacgccctcgatcgtcgacgccctcgacttcctcatctcg
gcccccgacgggcatcgcgccctcgccggcttcagccccgtcgcgctcgcccgcatgcgg
cgcgccggtgcgcagctgcaggccctgcggcgccgggcgggcttcgcgctcgccgacttc
gtgcacctcgtcgtccacgaactgcagctcgacatcgaagtcgccgcgaaccccgcccgc
cgactggggcgggagagcctggacgccttcgacgagctcgtcgccggcttcgcctcatcc
gccgagcatgcgaccctcggcgccttcctcggctggctgctcgaggccgaacagcgcgac
cggctgagccctcgcggcgaggagccggagccgggcgccgtgcaactgctctcgatccac
gcctcgaagggcctcgaatgggatgtcgtcgccatcccccggatggtggacggcgaactg
cccggccgcctgcggagcaccaagggatggatcgccttcggcgagctgccgtacgcattc
aagggcgatgccgaggagctgccggagttcgtctggcagggccacgagacacagaaggac
ttcgatgccgcgctcgccgcgttcggcgtggagaacgccgaacggcatgccgaggaggag
cggcgcctggcctatgtggcggtcacccgcgcgcgcgccgaactgctcctcagcgggtcc
tggtggtcccggcagacgaaaccgcgcccgccgggcacgttcctctgggagctctcggag
gccgggctcatcccgccggacacgctgcctgcggccccggccgagccggagaacccgctg
gacgcatcctccgagcggctgagctggcccctcgatccgctcggacgccgccgtgacgcc
gtcgagcacgccgcgcgtgccgtgcggggcgccgccgaacgcccgagcggcgagggcatc
ggtccgcggctcgcggagcacatcgaactgctcctcgccgaacgccgcgcccgcgaggcc
ggcgagcaggcgctcacggcgccgacgcgcatcccggcgtcccgcttcaaggactacgtc
gacgaccccgacgcggtcgagcgggcgctgcgccgcccgatgcccgagcggccgttccgg
gccacgcgcgtcggcaccctcttccactcctgggtcgaacgtcgctcgaacggcggcggc
gagctcgacgcgctcgacgccgccgatgcgctcggcggggccgatgcgctcgccgccgcc
gacggcctcgtgggcgccgccgacgaggaacgcatggcccggctccgcgacaccttcctc
gcctcgccgtggggccaccgcgcgccgacggccgtcgagctcgaactgcacctgccgctc
ggtgcgaacgtcttcgtctgcaagctcgacgccgtctacgaggcgccggccgaggcgatc
gcccgcggcatccgctacgaggtcgtcgactggaagacgggccgttcgccggccgacgcg
cgcgatctcgaactcaagcagacgcaactggccctgtaccggctcgcctatgcgaactgg
gcgggcatcgacccctccgagatcgacgccctcttctactacgtggaggaagacctggtg
atacgccccgagcggctctacgacgaagcggagttgcgctcggcctgggcgtcggtggcg
gcgcgttcggggtcggagggttcggaggctgcgggcgcctcggcatccgcgcccgtctga
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