Agromyces archimandritae: G127AT_15185
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Entry
G127AT_15185 CDS
T08034
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aarc
Agromyces archimandritae
Brite
KEGG Orthology (KO) [BR:
aarc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aarc03016
]
G127AT_15185
Enzymes [BR:
aarc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
G127AT_15185
Transfer RNA biogenesis [BR:
aarc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
G127AT_15185
BRITE hierarchy
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QTX04577
UniProt:
A0A975FMT1
LinkDB
All DBs
Position
complement(3287402..3288598)
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AA seq
398 aa
AA seq
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MDEFQVIDTADGFERAIDAIARGRGPVAVDAERASGFKYSQRAYLIQVYRRDSGTFLFDP
PPIGDFAPLESVIGTEEWVLHAASQDLACLREVGLDPERVFDTELAARLLGMPRVGLGTV
VEELLGIHLAKEHSAADWSTRPLPQSWLKYAALDVELLVDLRDRLELELDRTHKTELALQ
EFDSVVHRMPKAPAAEPWRRLSGIHGIRGQRNLAVARELWLARDSHASALDIAPGRLVPD
ASIVAAAKALPQSRRGLADLREFTGRASRSELDRWWAAVETGLASEELPSLRAKGDALPP
PRAWAGRNPPADARLRQARTALADVAETLQMPLENLLTPEYLRRVAWNPPEDLGIDAVSA
ALAAQGARPWQIAATAQTIVDAFVSAEQSLRDAEADAS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtggatgaattccaggtcatcgatacggccgacggattcgaacgcgcgatcgatgcgatc
gcgcgcggtcgcggtcccgtcgccgtggacgcggagcgcgcgagcgggttcaaatactcc
cagcgcgcctatctgatccaggtctaccggcgcgattcgggcaccttcctcttcgacccg
ccgcccatcggcgacttcgcccccttggaatcggtgatcggcaccgaggagtgggtgctg
cacgccgcgagccaggatctcgcctgcctgcgcgaggtgggcctcgaccccgaacgcgtc
ttcgacaccgagctcgccgcgcgtctgctcgggatgccccgggtcggcctcggcacggtc
gtcgaagagctgctcggcatccacctcgcgaaggagcattcggccgccgactggtcgacg
cgcccgctcccccagtcgtggctgaagtacgcggccctggacgtcgaactcctcgtcgac
ctccgcgaccggctcgaactcgaactcgaccgcacgcacaagaccgagctcgccctgcag
gagttcgactcggtcgtgcaccgaatgccgaaggcgccggccgccgaaccctggcggcgg
ctgtcaggcatccacggcatccgcggccagcgcaacctcgcggtcgcccgcgaactctgg
ctcgcccgcgactcccacgcctcggcgctcgacatcgcaccgggccggctcgtgccggac
gcctccatcgtcgccgcggccaaagccctcccgcaatcgcggcgcgggctcgcggacctc
cgcgagttcaccggtcgcgcgagccgcagcgaactcgaccgctggtgggcggccgtcgag
accggcctcgcctcggaagagctgccgagcctgcgtgcgaagggcgacgcgttgccgccg
ccgcgcgcatgggccggccgcaacccgcccgccgacgcccgcctccgtcaggcccgcacg
gccctcgccgacgtcgccgagacgttgcagatgccgctcgagaacctgctgacgcccgag
tacctgcgccgcgtcgcctggaacccgccggaggatctcggcatcgacgccgtctcggcg
gccctcgccgcgcagggcgcacgtccctggcagattgccgcaaccgcacagaccatcgtg
gatgcctttgtgagcgcggaacaaagcctgcgggacgccgaagcggacgcttcgtag
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