Azospirillum argentinense: D3093_05925
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Entry
D3093_05925 CDS
T08628
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
aare
Azospirillum argentinense
Pathway
aare03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aare00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D3093_05925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aare03019
]
D3093_05925
03009 Ribosome biogenesis [BR:
aare03009
]
D3093_05925
Enzymes [BR:
aare01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
D3093_05925
Messenger RNA biogenesis [BR:
aare03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D3093_05925
Ribosome biogenesis [BR:
aare03009
]
Prokaryotic type
rRNA processing factors
D3093_05925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QCN94835
UniProt:
A0A4D8PHN4
LinkDB
All DBs
Position
1241972..1245094
Genome browser
AA seq
1040 aa
AA seq
DB search
MAKRMLVDATHPEETRVAVVNGNRLEDLDFEIATRKQLKGNIYLAKVTRVEPSLQAAFVE
YGGNRHGFLAFSEIHPDYYRIPIADREALLAEERRLEEQAEARAEAAADGAVMAEPIRPE
VVVEENSPMPGSYAEAEGDGFEGDVPAFATDAGSDGGSDEAAESDEAPEGTAPAESPDVI
GGDEVEEAHRRRTRPLRSYKIQEVIKRRQVMLVQVTKEERGNKGAALTTYLSLPGRYCVL
MPNTGRGGGISRKITNPADRKRLKEILSDLDIPEGMAVILRTAGLERSKQEIKRDLEYLL
RLWDDIRVQTLKSSAPCLIYEEANLIKRSIRDLYTDDIDEIWVEGSTGFNTARDFMRMMM
PSHTKRVMQYQDDTIPLFHRYQVETQIDAIHSPVVQLRSGGYIVINPTEALVSIDVNSGK
STRERNIEETAYKTNLEAADEVARQLRLRDLAGLIVIDFIDMEEPRNNAAVERRLKEAMK
NDRARIQLGRISAFGLLELSRQRLRPSLLETNFERCPHCSGTGVIRSVESASLHVLRAIE
EEGIRKRSSEITVFVPSRIALYILNQKRGELTKIEDRYRFRVMVQADDTLIAPDLRLERV
KARTPEDDVPLVSAERVLAETDRILAAEAEEAEEEAPVVEAVEAEVTERADATGESEGDR
RRRRRRRRGRGRDREDGRAPFGESVEATDESDEVEAEAGETDETAIDEEAIERAQIDAPE
FVINDVDVGPAHIEDDEEEDAELAASEADDGADAFEQNGDGNGDGERKKRRRGKRGGRRR
SRQREGLEAGEGMPADGTEGEAEAESFPTAVEAGRAVNPPELPADMEPVEFDWVLTSAVA
AETAPETTADTAAEVPAAEPVAEEAPARKPRRGRAKATAAQAAEAVTAEPEAAPAKPKRA
AKGAAKGGKAAAKAAAAPEETATPPAKPSRSRKAKAVAVEAAPTPAPVAAPVAEEPKKRP
ARKRKTAADAPAEAAPAPAPVAAPVAEEAKKRPARKRKATADAPAEAAPAPAVSEAPAAP
ANEPASAAPEAKPRRGWWSR
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcgcatgctggtggacgccacgcacccggaggaaacccgggttgccgtggtc
aatgggaacagactcgaagacctcgacttcgaaatcgccacccggaagcaactcaagggc
aacatctaccttgccaaggtgacccgggtcgagccgtcgctgcaggcagccttcgtggag
tatggcgggaaccgccacggcttcctcgccttctcggaaatccatcccgactactaccgc
atcccaatcgccgaccgtgaggccctgctggccgaggagcgccggctggaggagcaggcc
gaggcccgcgccgaggccgccgccgacggcgccgtgatggccgagccgatccgcccggag
gtggtggtcgaggaaaactccccgatgcccggttcctacgccgaggccgagggcgacggg
ttcgagggcgacgtccctgctttcgccacggacgccggttcggatggtggttcggatgag
gccgcggagtcggacgaggctccggaaggcaccgctcccgccgaaagcccggacgtcatc
ggcggggacgaggtcgaggaggcccaccgccgccgcacccggccgctgcgcagctacaag
atccaggaggttatcaagcgccggcaggtcatgctggtccaggtgaccaaggaggagcgc
ggcaacaagggcgcggcgctgaccacctacctgtcgctgccgggccgctactgcgtgctg
atgcccaacacgggccgcggcggcgggatttcccgcaagatcaccaaccccgccgaccgc
aagcgcctgaaggaaatcctgtccgacctcgacattccggaaggcatggcggtcatcctg
cgcaccgcggggctggaacgctccaagcaggaaatcaagcgcgatctcgaatatctgctt
cgcctgtgggacgacatccgcgtgcagacgctgaagtcctccgcgccctgcctcatctat
gaggaggcgaacctcatcaagcgctcgatccgcgatctctacaccgacgacatcgacgag
atctgggtcgagggcagcaccggcttcaacaccgcgcgcgacttcatgcgcatgatgatg
ccaagccacaccaagcgcgtcatgcagtaccaggacgacacgattccgctgttccaccgc
tatcaggtggaaacgcagatcgacgcgatccacagcccggtcgtgcagctccgctccggc
ggctacatcgtcatcaacccgaccgaggcgctggtttccatcgacgtcaactcgggcaag
tcgacgcgcgagcgcaacatcgaggaaacggcctacaagaccaacctcgaagccgccgac
gaggtggcgcgccagcttcgcctgcgcgacctcgcgggcctcatcgtgatcgatttcatc
gacatggaggagccccgcaacaacgccgcggtggagcgccgcctgaaagaggcgatgaaa
aacgaccgggcgcgcatccagctcggccgcatctccgccttcggcctgctggagctgtcg
cgccagcgcctgcgcccgtcgctgctggaaaccaacttcgagcgctgcccgcactgctcc
ggcaccggcgtcatccgctcggtcgaatccgcctcgctgcacgtgctgcgcgccatcgag
gaggaaggcatccgcaagcggtcgtcggagatcaccgtcttcgtgccgagccggatcgcg
ctctacatcctcaaccagaagcgcggcgagctgaccaagatcgaggaccgctaccggttc
cgcgtcatggtccaggccgacgatacgctgatcgcgccggacctgcgccttgagcgcgtg
aaggcccgcacgccggaagacgacgtgccgctggtcagcgccgagcgcgtcctggccgag
accgaccgcatcctggccgccgaagccgaggaggccgaggaagaggcgcccgtcgtcgag
gccgtggaggccgaggtgacggagcgcgccgacgctaccggggagagcgagggcgaccgc
cgccgccgccgccgccgtcgccgtggccgtggccgtgaccgcgaggatggccgcgcgccg
ttcggcgagtccgtcgaagcgactgacgagagcgacgaggtcgaggccgaggccggcgag
accgacgagacggcgatcgacgaggaggcgatcgagcgcgcccagatcgacgcgccggag
ttcgtcatcaacgacgtcgatgtcggccccgcccacatcgaagacgatgaggaggaggac
gccgaactggccgcgtccgaggcggacgacggtgccgacgcgttcgagcagaacggcgac
ggcaacggcgacggtgagcgcaagaagcggcgccgcggcaagcgcggtggtcgccggcgg
tcccgccagcgcgagggtctggaagccggcgagggcatgcccgccgacggcaccgagggc
gaggcggaggccgagtccttcccgaccgccgtcgaggccggccgcgccgtcaacccgccg
gaactgccggcggacatggagccggtcgagttcgactgggtcctgaccagcgcggtggcc
gccgagaccgctccggaaaccacggcggacaccgccgcggaggttccggccgcggaaccc
gtcgcggaggaggctccggctcgcaagccgcgccgtggccgcgccaaggcgaccgccgcc
caggctgccgaagcggtgacggcggagccggaagcggcccccgccaagccgaagcgcgcc
gcgaagggcgccgccaaggggggcaaggccgctgcgaaggccgccgccgctccggaggaa
accgctacgccgccggccaagccgtcgcgcagccgcaaggcgaaggccgtggccgtcgag
gccgcccccaccccggcgccggttgcggccccggtcgccgaggagccgaagaagcgcccg
gcgcgcaagcgcaagaccgcggcggacgctcccgccgaggccgcgcccgctccggcaccg
gttgcggctccggtcgccgaggaagcgaagaagcgtccggcgcgcaagcgcaaggccacg
gcggatgctcccgccgaggcggcacccgctccggcggtcagcgaggcgccggcggctccg
gccaatgagccggccagcgccgccccggaggccaagccgcgccggggttggtggagccgc
tga
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