Azospirillum argentinense: D3093_09410
Help
Entry
D3093_09410 CDS
T08628
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aare
Azospirillum argentinense
Pathway
aare03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aare00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D3093_09410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aare03400
]
D3093_09410
Enzymes [BR:
aare01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
D3093_09410
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D3093_09410
DNA repair and recombination proteins [BR:
aare03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D3093_09410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QCN96434
UniProt:
A0A4D8PG75
LinkDB
All DBs
Position
complement(1976025..1976867)
Genome browser
AA seq
280 aa
AA seq
DB search
MPELPEVETVCRGLAPHLEGRTLVQVLQRRANLRVPFPDGFCERLTGRRVESVRRRAKYI
LVHLDDGTVLIAHLGMSGRMIITPERPDAWGAHDHVVLETDAGTVVTFNDARRFGLMDLA
MAETLAEHPLLRALGPEPLGNEFSGPVLAARLAGRMTSIKAALLDQSVVAGLGNIYVSEA
LFLARLSPTRIAATVTGAKAERLATAIRAVLERAIAAGGSSLRDYRQASGELGYFQHQFS
VYDREGAPCPGCTCDVAKTGGVRRIVQAGRSTFYCPQRQR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttcccgaagtcgaaaccgtctgccgtggcctcgccccgcatctggagggg
cggaccctggtccaggtgctccagcgccgcgccaacctgcgcgttccctttccggacggc
ttctgcgagcggctgaccggccgccgcgtcgagtcggtgcgccgccgcgccaaatacatc
ctggtccatctcgacgacgggacggtgctgatcgcccatctcggcatgtcgggccgcatg
atcatcacgccggagcgccccgacgcctggggcgcccacgaccatgtcgtgctggagacc
gacgccgggacggtggtgaccttcaacgacgcccgccgcttcggcctgatggacctcgcc
atggcggagacgctcgccgagcacccgctgctgcgcgcgctggggccggagccgctgggc
aacgaattctccggaccggtgctggccgcgcggctggccgggcggatgaccagcatcaag
gccgccctgctggaccagagcgtggtcgccgggctcggcaacatctacgtgtcggaggcg
ctgttcctcgcccgcctcagccccacgcgcatcgccgccacggtgaccggcgcgaaggcg
gagcggctggccacggcgatccgcgcggtgctggagcgggccatcgccgcggggggatcg
tccttgcgcgactaccggcaggcgtcgggggagctcggctatttccagcatcagttctcg
gtctacgaccgcgagggcgcgccctgtccgggctgcacctgcgacgtggcgaagaccggg
ggcgtccgccggatcgtccaggcgggtcgttcgactttctattgtccgcaacgccagcgt
tga
DBGET
integrated database retrieval system
