Azospirillum argentinense: D3093_11210
Help
Entry
D3093_11210 CDS
T08628
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aare
Azospirillum argentinense
Pathway
aare03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aare00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D3093_11210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aare03019
]
D3093_11210
Enzymes [BR:
aare01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D3093_11210
Messenger RNA biogenesis [BR:
aare03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D3093_11210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
HEM4
SUa-2TM
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QCN95778
UniProt:
A0A4D8PJH7
LinkDB
All DBs
Position
complement(2362906..2364342)
Genome browser
AA seq
478 aa
AA seq
DB search
MTEFSGLGLIEPLLRAVAEEGYQTATPIQAGAIPVLLEGRDVLGLAQTGTGKTAAFTLPI
LQRLFQNKKRVQAKAPRTLILTPTRELALQIGESFRTYGRHLPIRRTVIHGGVGQSPQVA
ALARGTDVLVATPGRLLDLMAQKQCVLDQVEIFVLDEADRMLDMGFIRDVRKVVAVLPKQ
RQTLLFSATMPEAVVELAHSILTDAERIEVAPQSTTVERIAQRVLFVDRADKRRLLADLL
QEGAMERTIVFARTKHGADRIADHLKKAGVPADAIHGDKSQSARVRALESFRSGDLKALV
ATDIAARGIDIDGITHVINFDLPNEPESYVHRIGRTARAGTDGSAVSFCDAEEVAYLKAI
EKTIRQPVPADHDHPYHASVVAAIHASSAKPPKPAPKQPRPGRGQPQQQAGGNKPQGQKP
QAPKAHGAKPPAPQGARVAGATGDQPLKAKVSANQQNRHNRRPAPHGGQPGGNKRSAA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaattcagtggcctcggcctgatcgagccccttctgcgcgccgtcgccgaagag
ggttaccagaccgccacgccgatccaggccggcgccatccccgttcttctggagggccgc
gacgtgctcggcctcgcccagaccggcaccggcaagaccgccgccttcaccctgccgatc
ctgcagcggctgttccagaacaagaagcgcgtgcaggccaaggcgccgcgcacgctgatc
ctgacgccgacgcgcgagctggcgctgcagatcggcgagagcttccgcacctacggccgg
cacctgccgatccgccgcacggtgatccacggcggcgtcgggcagagcccgcaggtcgcc
gccctggcccgcggcaccgacgtgctggtggcgaccccgggccgcctgctggacctgatg
gcccagaagcagtgcgtgctcgatcaggtcgagatcttcgtcctggacgaagccgaccgc
atgctcgacatgggcttcatccgcgacgtgcggaaggtggtcgcggtcctgccgaagcag
cgccagaccctgctgttctccgccaccatgccggaagccgtggtcgagctggcgcacagc
atcctgaccgacgccgagcggatcgaggtggcgccgcagtccaccacggtggagcgcatc
gcccagcgcgtgctgttcgtggaccgcgccgacaagcgccgcctgctcgccgacctcctc
caggagggcgccatggagcggacgatcgtcttcgcccgcaccaagcacggcgccgaccgc
atcgccgaccatctgaagaaggccggcgtcccggccgacgcgatccacggcgacaagtcg
cagtcggcccgcgtgcgcgcgctggaatccttccgcagcggcgacctgaaggcgctggtg
gcgaccgacatcgcggcgcgcggcatcgacatcgacggcatcacgcacgtcatcaacttc
gacctgccgaacgagccggaaagctatgtccaccgcatcggccgcaccgcccgtgccggc
accgacggcagcgcggtgtccttctgcgacgccgaggaggtggcctatctgaaggccatc
gaaaagaccatccgccagccggttccggcggaccacgaccatccctaccacgcgtcggtg
gtggcggcgatccacgcctcctccgccaagccgccgaagccggcgcccaagcagccgcgt
ccgggccgcggtcagccgcagcagcaggccggcggcaacaagccgcagggccagaagccc
caggcgccgaaggcccacggcgcgaagccgccggcgccgcagggcgcgcgggttgccggc
gccaccggcgaccagccgctgaaggccaaggtgtcggccaaccagcagaatcgccacaac
cgccgccccgccccgcacggcggccagccgggcggcaacaagcggtccgcggcctga
DBGET
integrated database retrieval system
