Azospirillum argentinense: D3093_14420
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Entry
D3093_14420 CDS
T08628
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aare
Azospirillum argentinense
Brite
KEGG Orthology (KO) [BR:
aare00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aare03032
]
D3093_14420 (topA)
03400 DNA repair and recombination proteins [BR:
aare03400
]
D3093_14420 (topA)
Enzymes [BR:
aare01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D3093_14420 (topA)
DNA replication proteins [BR:
aare03032
]
Prokaryotic type
DNA Topoisomerases
D3093_14420 (topA)
DNA repair and recombination proteins [BR:
aare03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D3093_14420 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QCN96545
LinkDB
All DBs
Position
p1:complement(60512..63355)
Genome browser
AA seq
947 aa
AA seq
DB search
MPGSNVVIVESPAKAKTINKYLGSDYTVVASFGHVRDLPARDGSVRPDEDFAMDWELGDR
SKRHIDEIAKAVKGAERVYLATDPDREGEAIAWHLSELLREKRLIDDSKVQRITFNEITK
SAVQAALEAPRDVSRELVDAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRLI
CERESEIEVFKPQEYWTIEVGFATPGGASFTAQLTQLDGKRLDKFALPAREAAEAAVARI
SPQAFSVATVERKQSRRNPSPPFTTSTLQQEASRKLGFGATRTMRTAQRLYEGVDIGGET
VGLITYMRTDGVSLSQEAIEGARNLIGSHWGERYVPAQPRVYKTAAKNAQEAHEAIRPTD
LFRRPEEVATYLEGDELRLYELIWKRTLASQMESAVLDQVAVDIASPSKDVVLRATGSVV
VFDGFLKVYQEDRDDGAADDDQERRLPAMEQGDALARGDISPEQHFTQPPPRYTEASLVK
KLEELGIGRPSTYASILQVLQDRNYVRLDKRRFIPEDRGRLVTAFLKNFFNRYVEYNFTA
DLENKLDEISDGRIDWKTVLRDFWRAFHVAVDGTKDLTITQVLTTLDEELGPHFFPTNAN
SDTPGHDPRVCPVCSQGRLGLKLGKMGAFIGCSRYPECRYTRPLAVANDENGEAQEGPRE
LGNDPETGLPVTVRRGPYGAYIQLGPPPVAAAPAEAVVEEAPADGKKTKGKKKVKVEAPK
PKRVSLPKGMAAADVDLDTALKLLALPRSIGNHPETGEDISAGIGRFGPYLKHGSVYKSL
TPDDDVLTIGINRAVDLLAGAAKKASAPAKTLGDHPKTGKPVTTGSGRFGPYVKHGSVYA
SIPKGTEADSVTLEQALELLEAKAAKDAAKKGKAPKDAEPAAADGAEAPAKAEKTTKAKA
TATKKEPAKKDAAKKAAPKKAAAKKADSADTDKTDAGEDKPAARKRA
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
ttgccgggcagcaacgtcgtcatcgtcgaatcgccggccaaggcgaaaaccatcaacaaa
taccttggctcggactacaccgtggtcgccagcttcggccatgtgcgcgaccttccggcg
cgcgacggatcggtgcgtccggacgaggacttcgccatggactgggagctgggcgaccgc
tccaagcgccacatcgacgagatcgccaaggcggtcaaaggggccgagcgcgtctatctc
gcaaccgacccggatcgcgaaggggaagccatcgcctggcatttgtcggagctgctgcgc
gaaaagcggctgatcgacgactccaaggtccagcgcatcactttcaacgaaatcaccaag
agcgccgtccaggccgcgctggaggccccgcgcgacgtctcgcgggagctggtggacgct
tatctggcccgccgcgccctcgattatctggtcggcttcaccctgtcgccggtgctgtgg
cgcaagctgccgggctcccgctcggcgggccgcgtgcagtcggtggcgctgcgcctgatc
tgcgagcgcgagtcggagatcgaggtcttcaagccgcaggaatactggaccatcgaggtg
ggcttcgccacgccgggcggcgcctccttcacggcccagctcacccagctcgacggcaag
cggctcgacaagttcgccctgcccgcccgcgaggcggcggaagccgcggtggcgcgcatc
agcccgcaggccttctcggtcgcgacggtggagcgcaagcagagccgccgcaacccctcc
ccgcccttcaccacctcgaccctgcagcaggaggcctcgcgcaagctgggcttcggcgcc
acccgcaccatgcggaccgcgcagcggctgtacgagggcgtggacatcggcggcgagacg
gtcggcctgatcacctacatgcgaaccgacggcgtcagcctgtcgcaggaggccatcgag
ggcgcccgcaacctgatcggctcccattggggcgagcgctacgtcccggcccagccgcgc
gtctacaagaccgccgccaagaacgcccaggaggcccacgaggccatccggccgaccgac
ctgttccgccgcccggaggaggtcgcgacctacctggaaggcgacgagctgcggctctac
gagctgatctggaagcgcacgctggccagccagatggaaagcgcggtgctggatcaggtg
gcggtggacatcgcctcgccgtccaaggacgtcgtgctgcgcgccaccggctcggtcgtc
gtgttcgacggcttcctcaaggtctatcaggaggaccgcgacgacggcgccgccgacgac
gaccaggagcgccgcctgcccgccatggagcagggcgacgccctcgcccgcggcgacatc
agcccggaacagcatttcacccagccgccgccccgctacaccgaggcgagcttggtcaag
aagctggaggagctgggcatcggccgcccgtccacctacgcctccatcctccaggtgctc
caggaccgcaattacgtgcggctggacaagcggcgcttcattccggaagaccgcggccgt
ctggtcaccgccttcctgaagaacttcttcaaccgctacgtcgagtacaacttcaccgcc
gacctggagaacaagctcgacgaaatctccgacgggcggatcgactggaagaccgtgctg
cgcgacttctggcgcgccttccacgtcgcggtggacgggaccaaggacctgaccatcacc
caggtgctgaccacgctggacgaggagttggggccgcacttcttcccgaccaacgccaac
agcgacacgccgggccatgacccccgcgtctgcccggtgtgcagccagggccggctcggc
ctgaagctcggcaagatgggcgccttcatcggctgctcgcgctacccggaatgccgctac
acccgcccgctcgccgtcgccaacgacgagaacggcgaggcgcaggaaggcccgcgcgag
ctgggcaacgaccccgaaaccggcctgccggtgaccgtgcggcgtggtccctacggcgcc
tacatccagctcggcccgcccccggtggccgccgccccggctgaggcggtggtcgaggaa
gcgcccgccgacggcaagaagaccaagggcaagaagaaggtcaaggtcgaggcgccaaag
cccaagcgcgtctccctgcccaagggcatggccgccgccgatgtggacctcgacacggcg
ctgaagctgctggccctgccgcgcagcatcggcaaccacccggagacgggcgaggacatc
agcgccggcatcggccgcttcggcccctacctgaagcacggcagtgtctacaagtcgctg
acgcccgacgacgacgtgctgaccatcggcatcaaccgcgccgtcgatctgctggccggc
gccgccaagaaggcgtcggccccggccaagacgctgggcgaccatccgaagaccggcaag
ccggtgaccaccgggtccggccgcttcggtccctacgtcaagcacggctccgtctacgcc
tccatccccaagggcacggaagcggacagcgtgacgctggagcaggcgctggagcttctg
gaggccaaggccgccaaagacgccgccaagaagggcaaggctccgaaggacgccgagccg
gcggcggccgacggtgccgaggcgcccgccaaggccgagaagacgaccaaggccaaggcg
accgccaccaagaaggagccggccaagaaggacgcggcgaagaaggccgctccgaaaaag
gcggccgccaagaaggccgacagcgccgacaccgacaagaccgacgccggcgaggataag
cccgccgcccgcaaacgggcttga
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