Azospirillum argentinense: D3093_16570
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Entry
D3093_16570 CDS
T08628
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aare
Azospirillum argentinense
Brite
KEGG Orthology (KO) [BR:
aare00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aare03032
]
D3093_16570
03400 DNA repair and recombination proteins [BR:
aare03400
]
D3093_16570
Enzymes [BR:
aare01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D3093_16570
DNA replication proteins [BR:
aare03032
]
Prokaryotic type
DNA Topoisomerases
D3093_16570
DNA repair and recombination proteins [BR:
aare03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D3093_16570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QCN96921
UniProt:
A0A4D8PNM0
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All DBs
Position
p1:504619..505737
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AA seq
372 aa
AA seq
DB search
MDGVTVTDPRTDAEEAAACAGLSYVCDDEPGIRRRRAGKGFSYRWPDGTRVTEEDTLERI
RKLAIPPAYRGVWICPDPDGHLQATGRDTRGRKQYRYHPRWTEMREGTKFGRMLDFCRTL
PAIRRQVDGDLARRGLPREKVLAAVVRLLETTLIRVGNESYARENSSYGLTTLRDDHADI
EGSEIRFTFKGKSGKEWNVALKDRRLARVVRACRDVPGDELFQYVDRDGQRHAVSSGDVN
EYLRAATGQDFTAKDFRTWAGTVLAAMALREFETFDSAAKAKRNVTHAIEQVAARLGNTA
SVCRKSYVHPEILDAYLEGNLLESLTREVETELREELPELEAEEAAVLAFLRGRLERERR
SRASESRRRRAA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggacggagtgacggtcaccgatccccgcaccgacgcggaagaggccgcggcctgcgcc
gggctgagctatgtctgcgacgacgagccgggcatccggcgacgccgcgccggcaagggc
ttctcctaccgctggcccgacggcacgcgggtgaccgaggaggacacgctggagcgcatc
cgcaagctggcgatccccccggcctaccgcggcgtctggatctgcccggacccggacggc
cacctccaggccacgggccgcgacacgcgcgggcgcaagcagtaccgctaccatccccgc
tggaccgagatgcgcgagggcacgaaattcgggcggatgctcgacttctgccgcaccctg
ccggccatccgccgtcaggtggacggcgacctcgcccgccgcggcctgccgcgggaaaag
gtgctggccgccgtggtccggctgctggagaccacgctgatccgcgtcggcaacgaaagc
tacgcgcgcgagaacagcagctacggcttgaccaccctgcgtgacgaccatgccgacatc
gagggatcggaaatccgcttcaccttcaagggcaagtccgggaaggaatggaacgtcgcg
ctgaaggaccgccgcctcgcccgcgtcgtccgtgcctgccgcgatgtgcccggggacgag
ctgttccagtatgtcgaccgcgacgggcagcgccacgcggtgagttccggcgacgtgaac
gagtatctgcgtgccgccacgggccaggacttcaccgccaaggacttccgcacctgggcc
ggcaccgtcctggccgccatggcgctgcgtgagttcgagaccttcgacagcgccgccaag
gccaagcgcaacgtcacccacgccatcgagcaggtggccgcccgcctcggcaacaccgcc
agcgtctgccgcaagagctacgtccatcccgagattttggacgcctatctggaaggcaac
ctgctggagtccctgacccgcgaggtcgagaccgaactgcgcgaggagcttccggagctg
gaggccgaggaggccgccgtgctggccttcctgcgcggccggctggagcgcgaacggcgg
tcccgcgccagcgagagccgacggcggcgcgccgcgtag
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